RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Tmed11Q9D2R4 215 aa10.05□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ppp1r2Q9DCL8 206 aa10.05□□□□□ -0.8
Copb1-201ENSMUST00000033012 Scube2Q9JJS0 997 aa10.05□□□□□ -0.8
Copb1-201ENSMUST00000033012 PnckQ9QYK9 343 aa10.05□□□□□ -0.8
Copb1-201ENSMUST00000033012 Usp21Q9QZL6 566 aa10.05□□□□□ -0.8
Copb1-201ENSMUST00000033012 Keap1Q9Z2X8 624 aaKnown RBP10.05□□□□□ -0.8
Copb1-201ENSMUST00000033012 Cntnap1O54991 1385 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Smurf2A2A5Z6 748 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ctnnd2O35927 1247 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Zfp1P08042 402 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 ThrbP37242 461 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Msx3P70354 204 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 SgcdP82347 289 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Zscan2Q07230 614 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 4933415F23RikQ14BX6 153 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Mrgprx2Q3UG50 352 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 ChfrQ810L3 664 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Fam49aQ8BHZ0 323 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Clptm1lQ8BXA5 539 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Q8BZE1 841 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Stau2Q8CJ67 570 aaKnown RBP10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Gprc6aQ8K4Z6 928 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Pcdhgb2Q91XX7 928 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Metap1dQ9CPW9 335 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ropn1lQ9EQ00 218 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ndrg3Q9QYF9 375 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Bmp10Q9R229 421 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Cpne6Q9Z140 557 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Osbpl10S4R1M9 766 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Cyp4a29A0A087WPC3 509 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Arhgef10lA2AWP8 1280 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Zfp973A2BE20 318 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Tcte1A6H639 498 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Gm2956E9PVJ0 216 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Gm5796E9Q7M8 205 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Rnpepl1G5E872 720 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Gm3629K7N6Y2 205 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Gm10340K7N708 205 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Gm8108K7N734 216 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Matn3O35701 481 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Rad51bO35719 350 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Npy5rO70342 466 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Sh3pxd2aO89032 1124 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 AldoaP05064 364 aaKnown RBP10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Nr4a1P12813 601 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Stat5aP42230 793 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Tnni3P48787 211 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Rin3P59729 980 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Slc30a3P97441 388 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Emx1Q04742 257 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Treml2Q2LA85 329 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Lgr6Q3UVD5 967 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ddx17Q501J6 650 aaKnown RBP10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Lats2Q7TSJ6 1042 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Moxd2Q7TT41 619 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Fbxo28Q8BIG4 368 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Pou6f2Q8BJI4 691 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ccdc184Q8BMK5 191 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Pcdhb21Q91V48 774 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Capn8Q91VA3 703 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Txnrd3Q99MD6 652 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Mrpl54Q9CPW3 135 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Mrpl57Q9CQF8 102 aaKnown RBP10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Aar2Q9D2V5 384 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Znf207Q9JMD0 495 aaKnown RBP10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Jag1Q9QXX0 1218 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Skint6A7XUZ6 1240 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Zbed5B2RPU8 756 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Zfp563B8JJZ9 448 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Gm5478D3Z6R0 159 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Nek2O35942 443 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 ArP19091 899 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Hoxd9P28357 339 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Vcam1P29533 739 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Stfa3P35173 103 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ppm1bP36993 390 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Smad1P70340 465 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Kcnk2P97438 426 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Rps5P97461 204 aaKnown RBP10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Itga4Q00651 1039 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Zdhhc11Q14AK4 347 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Hexim2Q3TVI4 313 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Zfp560Q3URI6 754 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Bcap29Q61334 240 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Gm5414Q6IFZ8 552 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Gpatch2lQ6PE65 482 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Glrx5Q80Y14 152 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Slitrk5Q810B7 957 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Lrrc8dQ8BGR2 859 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Nup107Q8BH74 926 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ckap4Q8BMK4 575 aaKnown RBP10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Slc8a2Q8K596 921 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ace2Q8R0I0 805 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Cog4Q8R1U1 785 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Ddx1Q91VR5 740 aaKnown RBP10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 2610042L04RikQ9D073 150 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Efcab1Q9D3N2 212 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Clec2gQ9D676 269 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Tmem41aQ9D8U2 264 aa10.04□□□□□ -0.8
Copb1-201ENSMUST00000033012 Tlr4Q9QUK6 835 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms