RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Rad9bQ6WBX7 403 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Slc9a4Q8BUE1 797 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Nlrp10Q8CCN1 673 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Mybpc1D3YU50 1127 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Pdia2D3Z6P0 527 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Il1rnP25085 178 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Stat6P52633 837 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Vps45P97390 570 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Srebf2Q3U1N2 1130 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Gpsm3Q3U1Z5 159 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Cpsf6Q6NVF9 551 aaKnown RBP15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Panx3Q8CEG0 392 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Dennd1cQ8CFK6 786 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Itm2cQ91VK4 269 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 HaghlQ9DB32 283 aa15.22■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Pramef6A2A8M8 474 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Polr2jO08740 117 aaKnown RBP15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Kpna3O35344 521 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Hnf4aP49698 474 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Tmem45aQ60774 273 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Smpd4Q6ZPR5 823 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Hyal5Q812F3 526 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Entpd3Q8BFW6 529 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Dmtf1Q8CE22 761 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Saysd1Q8K190 188 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Olfr1499Q8VG65 314 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Olfr1352Q8VGX5 309 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Pcdhb6Q91XZ4 772 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Sppl3Q9CUS9 384 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Ampd2Q9DBT5 798 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Cyp2a22B2RXZ2 492 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Gm3476K7N6V0 257 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Hoxc6P10629 235 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Wnt3aP27467 352 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Zfp935Q14DI0 353 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Abhd15Q5F2F2 459 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Slc20a1Q61609 681 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Slc25a23Q6GQS1 467 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Olfr20Q7TRX9 314 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Olfr213Q7TS32 327 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Thnsl2Q80W22 483 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Ppm1lQ8BHN0 360 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 PolhQ9JJN0 694 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Gm3259D3YUK0 475 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Mroh5E9PUJ8 762 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Prdm15E9Q8T2 1174 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Bub1O08901 1058 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 CkmP07310 381 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 CtscP97821 462 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Pik3r6Q3U6Q4 756 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Tapt1Q4VBD2 564 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Pik3c3Q6PF93 887 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Fnip2Q80TD3 1108 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Lrrc27Q80YS5 523 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Tfb1mQ8JZM0 345 aaKnown RBP15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Atp6ap1Q9R1Q9 463 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 TesminQ9WTJ6 475 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 AtrnQ9WU60 1428 aa15.21■□□□□ 0.03
Col2a1-201ENSMUST00000023123 Slit3Q9WVB4 1523 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Gm6509A0A0J9YUV1 481 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Ddi2A2ADY9 399 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Fam155bA2BDP1 471 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Gm6351K9J7D1 481 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Rgs5O08850 181 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Irf3P70671 419 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Sema5bQ60519 1093 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Celf3Q8CIN6 465 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Adgrg1Q8K209 687 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 PiguQ8K358 434 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Dhx36Q8VHK9 1001 aaKnown RBP15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Msh4Q99MT2 958 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Q9CXL3 195 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Lsm12Q9D0R8 195 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Usp21Q9QZL6 566 aa15.21■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Cntnap3E9PY62 1287 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Dnase1l3O55070 310 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 AladP10518 330 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Pcbp1P60335 356 aaKnown RBP15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Ctps2P70303 586 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Scarf1Q5ND28 820 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Vps72Q62481 368 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Mef2dQ63943 514 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 GnasQ6R0H7 1133 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Tmem220Q8BP07 167 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Elmo1Q8BPU7 727 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Mrpl45Q9D0Q7 306 aaKnown RBP15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 H2bfmQ9DAB5 224 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 PyglQ9ET01 850 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Syndig1A2ANU3 258 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Zw10O54692 779 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Cd4P06332 457 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 PvalbP32848 110 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Abhd10Q6PE15 297 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Parp12Q8BZ20 711 aaKnown RBP15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Syt15Q8C6N3 418 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Wnt9aQ8R5M2 365 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Rsph1Q8VIG3 301 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Phf10Q9D8M7 497 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 Zscan4eA0A1B0GRE8 505 aa15.2■□□□□ 0.02
Col2a1-201ENSMUST00000023123 AccsA2AIG8 502 aa15.2■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms