RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 WDTC1Q8N5D0 677 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 PLD5Q8N7P1 536 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 KDM1BQ8NB78 822 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 FAM110BQ8TC76 370 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 AURKBQ96GD4 344 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 RNF170Q96K19 258 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 RBBP8Q99708 897 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 AASDHPPTQ9NRN7 309 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 ZNF358Q9NW07 568 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 PRR12Q9ULL5 1215 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 AP4E1Q9UPM8 1137 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 PDE10AQ9Y233 779 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 MTF2Q9Y483 593 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 FAM149AA5PLN7 773 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 DHX15O43143 795 aaKnown RBP12.03□□□□□ -0.48
CAPN3-221ENST00000638141 CFBP00751 764 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 PIGRP01833 764 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 KRT19P08727 400 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 SPNP16150 400 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 LRPAP1P30533 357 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 SFNP31947 248 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 GRIA4P48058 902 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 DEFA1P59665 94 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 DEFA3P59666 94 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 DALRD3Q5D0E6 543 aaKnown RBP12.03□□□□□ -0.48
CAPN3-221ENST00000638141 SPANXN3Q5MJ09 141 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 C6orf141Q5SZD1 244 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 FAM182AQ5T1J6 154 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 SLFN12LQ6IEE8 588 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 NPNTQ6UXI9 565 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 JOSD2Q8TAC2 188 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 NDNFQ8TB73 568 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 MAGEE2Q8TD90 523 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-221ENST00000638141 BRSK1Q8TDC3 778 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 ELMO3Q96BJ8 720 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 KCTD14Q9BQ13 255 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-221ENST00000638141 AS3MTQ9HBK9 375 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 DDX28Q9NUL7 540 aaKnown RBP12.03□□□□□ -0.48
CAPN3-221ENST00000638141 ADPRHL2Q9NX46 363 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 PABPN1LA6NDY0 278 aaKnown RBP12.03□□□□□ -0.48
CAPN3-221ENST00000638141 ENPP3O14638 875 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 NPHS1O60500 1241 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 DDHD2O94830 711 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 ARHGEF15O94989 841 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 LDLRP01130 860 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 LTFP02788 710 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 YES1P07947 543 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 PTGS2P35354 604 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 CSRP3P50461 194 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 ALDH3A2P51648 485 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 CDH6P55285 790 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 PSMD5Q16401 504 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 LDHDQ86WU2 507 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 WDR49Q8IV35 697 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 KIAA0319LQ8IZA0 1049 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 DCLK2Q8N568 766 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 SMG8Q8ND04 991 aaKnown RBP12.03□□□□□ -0.48
CAPN3-221ENST00000638141 PSD4Q8NDX1 1056 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 AGR3Q8TD06 166 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 ZNF566Q969W8 418 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 ASPSCR1Q9BZE9 553 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 C2orf40Q9H1Z8 148 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 ABI2Q9NYB9 513 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-221ENST00000638141 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-221ENST00000638141 TNFRSF10DQ9UBN6 386 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 PSAT1Q9Y617 370 aa12.03□□□□□ -0.48
CAPN3-221ENST00000638141 SIP14410 1827 aa12.02□□□□□ -0.48
CAPN3-221ENST00000638141 AGAP5A6NIR3 686 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 TRIM77I1YAP6 450 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 PPEF1O14829 653 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-221ENST00000638141 PDPK1O15530 556 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 XYLBO75191 536 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 ATG7O95352 703 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 ASS1P00966 412 aaKnown RBP12.02□□□□□ -0.49
CAPN3-221ENST00000638141 APOA1P02647 267 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 BCAR1P56945 870 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 GJA9P57773 515 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 RPS6P62753 249 aaKnown RBP12.02□□□□□ -0.49
CAPN3-221ENST00000638141 GPLD1P80108 840 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 PRKCDQ05655 676 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 XKR9Q5GH70 373 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 KCTD20Q7Z5Y7 419 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 SIAH1Q8IUQ4 282 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 LIX1LQ8IVB5 337 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 FBXL6Q8N531 539 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 MINDY1Q8N5J2 469 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 CHDHQ8NE62 594 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-221ENST00000638141 MCPH1Q8NEM0 835 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 LILRB1Q8NHL6 650 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-221ENST00000638141 MCRS1Q96EZ8 462 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 PSKH2Q96QS6 385 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 TBCBQ99426 244 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 ACE2Q9BYF1 805 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-221ENST00000638141 RPRD1BQ9NQG5 326 aaKnown RBP12.02□□□□□ -0.49
CAPN3-221ENST00000638141 IL37Q9NZH6 218 aa12.02□□□□□ -0.49
CAPN3-221ENST00000638141 ZFC3H1O60293 1989 aaKnown RBP12.02□□□□□ -0.49
CAPN3-221ENST00000638141 A0A096LPK6 155 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 PRSS23O95084 383 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms