RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ACOT2P49753 483 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 NCF4Q15080 339 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 CCDC85BQ15834 202 aaPredicted RBP15.37■□□□□ 0.05
NOP56-220ENST00000616692 CNKSR3Q6P9H4 555 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 ADGRF2Q8IZF7 708 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 TEX19Q8NA77 164 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 TMEM35BQ8NCS4 154 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 MCUQ8NE86 351 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 ABHD11Q8NFV4 315 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 RIPOR3Q96MK2 946 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 IL12RB2Q99665 862 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 GJB4Q9NTQ9 266 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 TMEM216Q9P0N5 145 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 RPS6KA6Q9UK32 745 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 PSMD13Q9UNM6 376 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 COL4A6Q14031 1691 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 CCDC163A0A0D9SF12 145 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 ISPDA4D126 451 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 ZNF487B1APH4 448 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 H3BMM5 538 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 MYL4P12829 197 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 RPS2P15880 293 aaKnown RBP15.37■□□□□ 0.05
NOP56-220ENST00000616692 ABCB4P21439 1286 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 RPL35P42766 123 aaKnown RBP15.37■□□□□ 0.05
NOP56-220ENST00000616692 CYP4F8P98187 520 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 TEKQ02763 1124 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 ZNF267Q14586 743 aaPredicted RBP15.37■□□□□ 0.05
NOP56-220ENST00000616692 MCMDC2Q4G0Z9 681 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 CCDC137Q6PK04 289 aaKnown RBP15.37■□□□□ 0.05
NOP56-220ENST00000616692 HTR3DQ70Z44 454 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 C1orf21Q9H246 121 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 GRHL1Q9NZI5 618 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 ACTL7AQ9Y615 435 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 PIAS3Q9Y6X2 628 aa15.37■□□□□ 0.05
NOP56-220ENST00000616692 LAMA4Q16363 1823 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 A6NJY4 79 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 RBAK-RBAKDNI3L0D1 243 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 KCNK2O95069 426 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 NTRK1P04629 796 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 IL6P05231 212 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 ENO1P06733 434 aaKnown RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 FABP1P07148 127 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 CA3P07451 260 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 SELPP16109 830 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 RAB3AP20336 220 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 EEF1DP29692 281 aaKnown RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 GRM5P41594 1212 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 AFMP43652 599 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 PRKAA2P54646 552 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 SKIV2LQ15477 1246 aaKnown RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 ASTE1Q2TB18 679 aaPredicted RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 Q5BKY6 102 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 SUSD1Q6UWL2 747 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 STXBP4Q6ZWJ1 553 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 KLHL6Q8WZ60 621 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 HTRA1Q92743 480 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 ARHGEF26Q96DR7 871 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 FOPNLQ96NB1 174 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 SPATA6Q9NWH7 488 aaPredicted RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 ZMIZ1Q9ULJ6 1067 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 SF3B1O75533 1304 aaKnown RBP eCLIP15.36■□□□□ 0.052e-8■■■■■ 28.6
NOP56-220ENST00000616692 TSC22D2O75157 780 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 TXNP10599 105 aaKnown RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 CYP11B1P15538 503 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 PTENP60484 403 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 RPS6P62753 249 aaKnown RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 LDLRAP1Q5SW96 308 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 KRT80Q6KB66 452 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 CCDC149Q6ZUS6 474 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 PHC2Q8IXK0 858 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 OR4D10Q8NGI6 311 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 FBXO30Q8TB52 745 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 SMG7Q92540 1137 aaKnown RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 HLA-CQ95604 372 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 NPLQ9BXD5 320 aaPredicted RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 ZCCHC2Q9C0B9 1178 aaKnown RBP15.36■□□□□ 0.05
NOP56-220ENST00000616692 KCNH7Q9NS40 1196 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 INVSQ9Y283 1065 aa15.36■□□□□ 0.05
NOP56-220ENST00000616692 POM121CA8CG34 1229 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 KRT1P04264 644 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 HOXD8P13378 290 aaPredicted RBP15.35■□□□□ 0.05
NOP56-220ENST00000616692 STMN1P16949 149 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 UGT2B10P36537 528 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 HES5Q5TA89 166 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 CFAP77Q6ZQR2 320 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 OR8H2Q8N162 312 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 METTL13Q8N6R0 699 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 NSUN6Q8TEA1 469 aaKnown RBP15.35■□□□□ 0.05
NOP56-220ENST00000616692 PTP4A1Q93096 173 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 PDXPQ96GD0 296 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 ZNF416Q9BWM5 594 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 NAA50Q9GZZ1 169 aaKnown RBP15.35■□□□□ 0.05
NOP56-220ENST00000616692 RHBGQ9H310 441 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 OLAHQ9NV23 265 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 COA4Q9NYJ1 87 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 ZNF624Q9P2J8 865 aaPredicted RBP15.35■□□□□ 0.05
NOP56-220ENST00000616692 TAGLN3Q9UI15 199 aa15.35■□□□□ 0.05
NOP56-220ENST00000616692 TRMT6Q9UJA5 497 aaKnown RBP15.35■□□□□ 0.05
NOP56-220ENST00000616692 FBXO2Q9UK22 296 aaPredicted RBP15.35■□□□□ 0.05
NOP56-220ENST00000616692 HRH3Q9Y5N1 445 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms