RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 CCDC6Q16204 474 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 SPRED3Q2MJR0 410 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 SYCP2LQ5T4T6 812 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 PID1Q7Z2X4 250 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 CYP2U1Q7Z449 544 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 PRPF39Q86UA1 669 aaKnown RBP12.91□□□□□ -0.34
CCL4-201ENST00000613947 DCLK2Q8N568 766 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 PAF1Q8N7H5 531 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 CCDC63Q8NA47 563 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 C1orf54Q8WWF1 131 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 DNASE2BQ8WZ79 361 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 SNX19Q92543 992 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 PGM2Q96G03 612 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 IMP4Q96G21 291 aaKnown RBP12.91□□□□□ -0.34
CCL4-201ENST00000613947 ZNF317Q96PQ6 595 aaPredicted RBP12.91□□□□□ -0.34
CCL4-201ENST00000613947 RBM15Q96T37 977 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCL4-201ENST00000613947 VAT1Q99536 393 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 SLC25A51Q9H1U9 297 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 GLOD4Q9HC38 313 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 PREBQ9HCU5 417 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 PCDH12Q9NPG4 1184 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 KLHL8Q9P2G9 620 aaPredicted RBP12.91□□□□□ -0.34
CCL4-201ENST00000613947 GMEB2Q9UKD1 530 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 TTC7AQ9ULT0 858 aaPredicted RBP12.91□□□□□ -0.34
CCL4-201ENST00000613947 C15orf41Q9Y2V0 281 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 SLCO1B1Q9Y6L6 691 aa12.91□□□□□ -0.34
CCL4-201ENST00000613947 DMXL1Q9Y485 3027 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 GOLGA6L10A0A0M3HER8 536 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 A0A1W2PQU0 124 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 UPK3BL1B0FP48 263 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 UPK3BL2E5RIL1 263 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 PGRMC1O00264 195 aaKnown RBP12.9□□□□□ -0.34
CCL4-201ENST00000613947 NEMP1O14524 444 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 AP1G1O43747 822 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 RNGTTO60942 597 aaKnown RBP12.9□□□□□ -0.34
CCL4-201ENST00000613947 PPFIA2O75334 1257 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 NUDT17P0C025 328 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 XPAP23025 273 aaPredicted RBP12.9□□□□□ -0.34
CCL4-201ENST00000613947 PAX7P23759 505 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 CCR5P51681 352 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 POLR2LP62875 67 aaKnown RBP12.9□□□□□ -0.34
CCL4-201ENST00000613947 SEMG2Q02383 582 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 WDR45BQ5MNZ6 344 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 ARMC12Q5T9G4 340 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 NEK5Q6P3R8 708 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 TMC3Q7Z5M5 1100 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 SYT12Q8IV01 421 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 APLFQ8IW19 511 aaPredicted RBP12.9□□□□□ -0.34
CCL4-201ENST00000613947 SPATA22Q8NHS9 363 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 ORAI3Q9BRQ5 295 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 TMEM121Q9BTD3 319 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 TXLNGYQ9BZA5 131 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 MIR1-1HGQ9H1L0 117 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 NCDNQ9UBB6 729 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 PILRBQ9UKJ0 227 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 NOVA2Q9UNW9 492 aaKnown RBP12.9□□□□□ -0.34
CCL4-201ENST00000613947 ZFR2Q9UPR6 939 aaKnown RBP12.9□□□□□ -0.34
CCL4-201ENST00000613947 CHKBQ9Y259 395 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 PCDHGA5Q9Y5G8 931 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 CABIN1Q9Y6J0 2220 aa12.9□□□□□ -0.34
CCL4-201ENST00000613947 F5H423 210 aaPredicted RBP12.89□□□□□ -0.35
CCL4-201ENST00000613947 LATO43561 262 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 TSPAN6O43657 245 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 LIASO43766 372 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 FZD6O60353 706 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 PGLSO95336 258 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 MT-CYBP00156 380 aaPredicted RBP12.89□□□□□ -0.35
CCL4-201ENST00000613947 PRLP01236 227 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 NFKB1P19838 968 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 MPLP40238 635 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 CCNG1P51959 295 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 TRIM69Q86WT6 500 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 HORMAD1Q86X24 394 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 GBP7Q8N8V2 638 aaPredicted RBP12.89□□□□□ -0.35
CCL4-201ENST00000613947 FAM71DQ8N9W8 422 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 C1orf216Q8TAB5 229 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 PIH1D2Q8WWB5 315 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 KLK6Q92876 244 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 FAM122AQ96E09 287 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 FEM1CQ96JP0 617 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 FERMT1Q9BQL6 677 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 TMEM109Q9BVC6 243 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 TDRD1Q9BXT4 1180 aaKnown RBP12.89□□□□□ -0.35
CCL4-201ENST00000613947 FRMD8P1Q9BZ68 369 aaPredicted RBP12.89□□□□□ -0.35
CCL4-201ENST00000613947 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
CCL4-201ENST00000613947 SMOC1Q9H4F8 434 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 UBP1Q9NZI7 540 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 NOP53Q9NZM5 478 aaKnown RBP12.89□□□□□ -0.35
CCL4-201ENST00000613947 TRHDEQ9UKU6 1024 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 SPTBN4Q9H254 2564 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 TNRC6BQ9UPQ9 1833 aaKnown RBP12.89□□□□□ -0.35
CCL4-201ENST00000613947 A0A1W2PPC4 97 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 ANKRD33BA6NCL7 494 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 GFRA3O60609 400 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 CCND1P24385 295 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 CD27P26842 260 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 PLA2G5P39877 138 aa12.89□□□□□ -0.35
CCL4-201ENST00000613947 SUOXP51687 545 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms