RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 L2HGDHQ9H9P8 463 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 ARNT2Q9HBZ2 717 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 EIF2B3Q9NR50 452 aaKnown RBP18.9■□□□□ 0.62
CCDC9-205ENST00000600117 GOLGA6AQ9NYA3 693 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 ZFR2Q9UPR6 939 aaKnown RBP18.9■□□□□ 0.62
CCDC9-205ENST00000600117 BPTFQ12830 3046 aa18.9■□□□□ 0.62
CCDC9-205ENST00000600117 CAPN8A6NHC0 703 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 NPIPB15A6NHN6 443 aaPredicted RBP18.89■□□□□ 0.61
CCDC9-205ENST00000600117 FAM47DPA6NHR8 397 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 LRRC72A6NJI9 287 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 ERI2A8K979 691 aaKnown RBP18.89■□□□□ 0.61
CCDC9-205ENST00000600117 PATE3B3GLJ2 98 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 RAD51CO43502 376 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 TSPAN6O43657 245 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 USP12O75317 370 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 SUN1O94901 812 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 LHCGRP22888 699 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 IVDP26440 423 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 HNF1BP35680 557 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 MAGEA6P43360 314 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 PPP2CBP62714 309 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 PPP2CAP67775 309 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 FAM193AP78312 1265 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 IRX4P78413 519 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 BASP1P80723 227 aaKnown RBP18.89■□□□□ 0.61
CCDC9-205ENST00000600117 MRPS25P82663 173 aaKnown RBP18.89■□□□□ 0.61
CCDC9-205ENST00000600117 RPL6Q02878 288 aaKnown RBP18.89■□□□□ 0.61
CCDC9-205ENST00000600117 SYCP2LQ5T4T6 812 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 KIAA0895LQ68EN5 471 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 NEK5Q6P3R8 708 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 USP45Q70EL2 814 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 SLC25A41Q8N5S1 370 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 MNS1Q8NEH6 495 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 SLC32A1Q9H598 525 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 CELSR3Q9NYQ7 3312 aa18.89■□□□□ 0.61
CCDC9-205ENST00000600117 LRRK1Q38SD2 2015 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3DA0A087WVF3 549 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3IA0A087WXS9 549 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3EA0A087X179 549 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3KA0A087X1G2 549 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3FA6NER0 549 aaPredicted RBP18.88■□□□□ 0.61
CCDC9-205ENST00000600117 FAM187AA6NFU0 413 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3LB9A6J9 549 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 MAP3K13O43283 966 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 RNGTTO60942 597 aaKnown RBP18.88■□□□□ 0.61
CCDC9-205ENST00000600117 NDUFS2O75306 463 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 FGF1P05230 155 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3HP0C7X1 549 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 VIPR1P32241 457 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 CCR5P51681 352 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 MSLNQ13421 630 aaPredicted RBP18.88■□□□□ 0.61
CCDC9-205ENST00000600117 KCNJ11Q14654 390 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 CDKN3Q16667 212 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TMEM259Q4ZIN3 620 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 SEL1L3Q68CR1 1132 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3GQ6DHY5 549 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3CQ6IPX1 549 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 CRTC1Q6UUV9 634 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TSPAN33Q86UF1 283 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TRIM69Q86WT6 500 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 HORMAD1Q86X24 394 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 SLC41A1Q8IVJ1 513 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 TBC1D3Q8IZP1 549 aaPredicted RBP18.88■□□□□ 0.61
CCDC9-205ENST00000600117 NDUFAF2Q8N183 169 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 MMGT1Q8N4V1 131 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 DEFB119Q8N690 84 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 CADM4Q8NFZ8 388 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 CCHCR1Q8TD31 782 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 CPT1BQ92523 772 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 ASIC3Q9UHC3 531 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 KLK13Q9UKR3 277 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 SPO11Q9Y5K1 396 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 CEP192Q8TEP8 1941 aa18.88■□□□□ 0.61
CCDC9-205ENST00000600117 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 A0A0U1RQS6 177 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 A0A1W2PQU0 124 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 TCRBV7S3A2A0A539 114 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 CTAGE15A4D2H0 777 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 METTL12A8MUP2 240 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 A8MX80 341 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 E7EVH7 732 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 NEMP1O14524 444 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 LATO43561 262 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 MMP20O60882 483 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 HEXIM1O94992 359 aaKnown RBP18.87■□□□□ 0.61
CCDC9-205ENST00000600117 PCDH8O95206 1070 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 IGHV4-34P06331 123 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 APRTP07741 180 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 PIRTP0C851 137 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 CTAGE8P0CG41 777 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 CYP2A6P11509 494 aaPredicted RBP18.87■□□□□ 0.61
CCDC9-205ENST00000600117 TPSB2P20231 275 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 GRIA1P42261 906 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 TPSAB1Q15661 275 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 CNGA3Q16281 694 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 DNTTIP2Q5QJE6 756 aaKnown RBP18.87■□□□□ 0.61
CCDC9-205ENST00000600117 ANKRD22Q5VYY1 191 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 NAPEPLDQ6IQ20 393 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 KIAA1161Q6NSJ0 714 aa18.87■□□□□ 0.61
CCDC9-205ENST00000600117 CCDC70Q6NSX1 233 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms