RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SMTNL1A8MU46 457 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 TEX22C9J3V5 150 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 INAFM1C9JVW0 142 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 TNPO2O14787 897 aaKnown RBP5.09□□□□□ -1.59
SMAD4-216ENST00000593223 TSPAN4O14817 238 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 ASAP2O43150 1006 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 RGS14O43566 566 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 LDB2O43679 373 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 PLOD3O60568 738 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 LCATP04180 440 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 SLC2A4P14672 509 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 HOXD3P31249 432 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-216ENST00000593223 ARRB2P32121 409 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 THPOP40225 353 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 PAFAH1B1P43034 410 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 RFX5P48382 616 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-216ENST00000593223 HTR6P50406 440 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 CLCN5P51795 746 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 SNX16P57768 344 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 EFNB1P98172 346 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 PLIN5Q00G26 463 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 CAMK1Q14012 370 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 ZNF766Q5HY98 468 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 SLC10A5Q5PT55 438 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 FAM180BQ6P0A1 224 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 CPLX2Q6PUV4 134 aaKnown RBP5.09□□□□□ -1.59
SMAD4-216ENST00000593223 C17orf99Q6UX52 265 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-216ENST00000593223 FAM160B2Q86V87 743 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 ERC1Q8IUD2 1116 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 TMTC1Q8IUR5 882 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 RBFAQ8N0V3 343 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 FBXL14Q8N1E6 418 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 TEX45Q8NA69 505 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 TMEM163Q8TC26 289 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 TMEM170AQ8WVE7 144 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 ATP6V1E2Q96A05 226 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 TBC1D31Q96DN5 1066 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 APOPT1Q96IL0 206 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 CFAP53Q96M91 514 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 CAMK1GQ96NX5 476 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 YME1L1Q96TA2 773 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 EIF2AK1Q9BQI3 630 aaKnown RBP5.09□□□□□ -1.59
SMAD4-216ENST00000593223 NTPCRQ9BSD7 190 aaKnown RBP5.09□□□□□ -1.59
SMAD4-216ENST00000593223 CDT1Q9H211 546 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 WDR26Q9H7D7 661 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 VEZTQ9HBM0 779 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 WASH6PQ9NQA3 447 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 BLOC1S4Q9NUP1 217 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 BEX4Q9NWD9 120 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-216ENST00000593223 EPS15L1Q9UBC2 864 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 CFDP1Q9UEE9 299 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-216ENST00000593223 ARHGAP26Q9UNA1 814 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 RPRD2Q5VT52 1461 aaKnown RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 CPLX1O14810 134 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 URODP06132 367 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 CBSLP0DN79 551 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 NAGAP17050 411 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 ZNF8P17098 575 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 POU1F1P28069 291 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 HOXA11P31270 313 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 CBSP35520 551 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 CENPAP49450 140 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 CTCFP49711 727 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 FOXG1P55316 489 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 HDAC4P56524 1084 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 VEPH1Q14D04 833 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 ZNF284Q2VY69 593 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 PLEKHO1Q53GL0 409 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 ZNF667Q5HYK9 610 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 FASTKD5Q7L8L6 764 aaKnown RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 RRM2BQ7LG56 351 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 PATL1Q86TB9 770 aaKnown RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 TADA2BQ86TJ2 420 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 GPAT4Q86UL3 456 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 HEATR4Q86WZ0 1026 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 NBPF5PQ86XG9 351 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 SAMD14Q8IZD0 417 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 MCPH1Q8NEM0 835 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 ZCCHC10Q8TBK6 192 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 HDAC2Q92769 488 aaKnown RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 OTULINQ96BN8 352 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 RNF125Q96EQ8 232 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 ZC3HAV1LQ96H79 300 aaKnown RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 MPHOSPH8Q99549 860 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 NUDT16L1Q9BRJ7 211 aaKnown RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 FUZQ9BT04 418 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 MRPL9Q9BYD2 267 aaKnown RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 PRKRIP1Q9H875 184 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-216ENST00000593223 SNTG1Q9NSN8 517 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 NKIRAS2Q9NYR9 191 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 IL36RNQ9UBH0 155 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 CTNNAL1Q9UBT7 734 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 SNX5Q9Y5X3 404 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 NWD2Q9ULI1 1742 aa5.08□□□□□ -1.6
SMAD4-216ENST00000593223 CKAP5Q14008 2032 aa5.07□□□□□ -1.6
SMAD4-216ENST00000593223 PLEKHH2Q8IVE3 1493 aa5.07□□□□□ -1.6
SMAD4-216ENST00000593223 MBD5Q9P267 1494 aa5.07□□□□□ -1.6
SMAD4-216ENST00000593223 RIMS2Q9UQ26 1411 aa5.07□□□□□ -1.6
SMAD4-216ENST00000593223 MTUS2Q5JR59 1369 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms