RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 DRG1Q9Y295 367 aaKnown RBP21.56■■□□□ 1.04
R3HDM4-206ENST00000590454 LOC400499M0QZD8 3231 aa21.56■■□□□ 1.04
R3HDM4-206ENST00000590454 IGSF10Q6WRI0 2623 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 CFAP69A5D8W1 941 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 LRRC72A6NJI9 287 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 A8MX80 341 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 RIOK3O14730 519 aaKnown RBP21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 RNGTTO60942 597 aaKnown RBP21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 IFNB1P01574 187 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 CTPS1P17812 591 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 MAT2AP31153 395 aaKnown RBP21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 CSNK1EP49674 416 aaKnown RBP21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 AFF3P51826 1226 aaKnown RBP21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 OLIG2Q13516 323 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 CYP1B1Q16678 543 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 FAXCQ5TGI0 409 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 KIAA0895LQ68EN5 471 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 PAF1Q8N7H5 531 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 MAGOHBQ96A72 148 aaKnown RBP21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 CRELD1Q96HD1 420 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 NAP1L3Q99457 506 aaPredicted RBP21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 FERMT1Q9BQL6 677 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 PCED1AQ9H1Q7 454 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 BTBD3Q9Y2F9 522 aa21.55■■□□□ 1.04
R3HDM4-206ENST00000590454 A0A1W2PQU0 124 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 FAM149AA5PLN7 773 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 AP1G1O43747 822 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 PCDH8O95206 1070 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 ALPIP09923 528 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 XPAP23025 273 aaPredicted RBP21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 STIP1P31948 543 aaKnown RBP21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 ABCG1P45844 678 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 WNT3AP56704 352 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 RALGDSQ12967 914 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 GALNT3Q14435 633 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 SMAD1Q15797 465 aaKnown RBP21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 ITPRIPL1Q6GPH6 555 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 ARHGEF18Q6ZSZ5 1173 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 LPCAT1Q8NF37 534 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 SPOCK2Q92563 424 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 RAB7BQ96AH8 199 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 MRGPRX2Q96LB1 330 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 ORAI3Q9BRQ5 295 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 WRAP53Q9BUR4 548 aaKnown RBP21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 PREBQ9HCU5 417 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 FAM153AQ9UHL3 310 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 ACACAQ13085 2346 aa21.54■■□□□ 1.04
R3HDM4-206ENST00000590454 SMG1Q96Q15 3661 aaKnown RBP21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 TK2O00142 265 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 MMP20O60882 483 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 COILP38432 576 aaPredicted RBP21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 MMP12P39900 470 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 GRK6P43250 576 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 CCDC15Q0P6D6 951 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 FGL2Q14314 439 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 TEAD4Q15561 434 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 KIF19Q2TAC6 998 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 IPMKQ8NFU5 416 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 SNX19Q92543 992 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 DCBLD2Q96PD2 775 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 KDM4CQ9H3R0 1056 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 HOMER3Q9NSC5 361 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 B4GALT6Q9UBX8 382 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 PHTF1Q9UMS5 762 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 SNX11Q9Y5W9 270 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 APC2O95996 2303 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 LRRK1Q38SD2 2015 aa21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 URB1O60287 2271 aaKnown RBP21.53■■□□□ 1.04
R3HDM4-206ENST00000590454 GCN1Q92616 2671 aaKnown RBP21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 IGLON5A6NGN9 336 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 NPIPB15A6NHN6 443 aaPredicted RBP21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 NEMP1O14524 444 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 PHF2O75151 1096 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 RPL22P35268 128 aaKnown RBP21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 CHRNA4P43681 627 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 POLR2LP62875 67 aaKnown RBP21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 CDK18Q07002 472 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 SPARCL1Q14515 664 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 TRIP13Q15645 432 aaPredicted RBP21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 SLC14A2Q15849 920 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 QPCTQ16769 361 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 ZNF284Q2VY69 593 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 P3H1Q32P28 736 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 TMEM52BQ4KMG9 183 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 TMEM259Q4ZIN3 620 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 TSPAN33Q86UF1 283 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 ZSCAN30Q86W11 494 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 HORMAD1Q86X24 394 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 ZNF592Q92610 1267 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 PPIL1Q9Y3C6 166 aa21.52■■□□□ 1.04
R3HDM4-206ENST00000590454 PLXNA2O75051 1894 aa21.52■■□□□ 1.03
R3HDM4-206ENST00000590454 TRPM6Q9BX84 2022 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 WNT9AO14904 365 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 LATO43561 262 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 TSPAN6O43657 245 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 ZNF189O75820 626 aaPredicted RBP21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 AGTP01019 485 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 LHCGRP22888 699 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 HNF1BP35680 557 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms