RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SEMA3CQ99985 751 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 POLR1EQ9GZS1 481 aaKnown RBP10.43□□□□□ -0.74
SDF2-208ENST00000589788 LACRTQ9GZZ8 138 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 GPAMQ9HCL2 828 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 RBM22Q9NW64 420 aaKnown RBP eCLIP10.43□□□□□ -0.74
SDF2-208ENST00000589788 AMACRQ9UHK6 382 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 SALL4Q9UJQ4 1053 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 PCDHGC4Q9Y5F7 938 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 PCDHGB2Q9Y5G2 931 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 HS3ST3A1Q9Y663 406 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 DUSP10Q9Y6W6 482 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 CABIN1Q9Y6J0 2220 aa10.43□□□□□ -0.74
SDF2-208ENST00000589788 A0A1B0GTQ1 180 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 MED19A0JLT2 244 aaPredicted RBP10.42□□□□□ -0.74
SDF2-208ENST00000589788 MACROD2A1Z1Q3 448 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 GOLGA6L9A6NEM1 432 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 GIPC1O14908 333 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 RAD51BO15315 384 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 PCDHGA12O60330 932 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 CST8O60676 142 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 SOCS5O75159 536 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 CPP00450 1065 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 THBS1P07996 1170 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 KRT10P13645 584 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 CR2P20023 1033 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 CES1P23141 567 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 IL9RQ01113 521 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 PPIDQ08752 370 aaKnown RBP10.42□□□□□ -0.74
SDF2-208ENST00000589788 AP1B1Q10567 949 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 LLGL1Q15334 1064 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 ARSJQ5FYB0 599 aaPredicted RBP10.42□□□□□ -0.74
SDF2-208ENST00000589788 TFDP3Q5H9I0 405 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 KAZNQ674X7 775 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 NPNTQ6UXI9 565 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 GCNT7Q6ZNI0 430 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 Q6ZSR6 202 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 BZW1Q7L1Q6 419 aaKnown RBP10.42□□□□□ -0.74
SDF2-208ENST00000589788 ABI3BPQ7Z7G0 1075 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 ZSWIM9Q86XI8 627 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 SPATS2Q86XZ4 545 aaKnown RBP10.42□□□□□ -0.74
SDF2-208ENST00000589788 DCP2Q8IU60 420 aaKnown RBP10.42□□□□□ -0.74
SDF2-208ENST00000589788 REXO1L1PQ8IX06 675 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.42□□□□□ -0.74
SDF2-208ENST00000589788 DENND6BQ8NEG7 585 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 OR13H1Q8NG92 308 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 EXD1Q8NHP7 514 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 ECHDC3Q96DC8 303 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 RBM41Q96IZ5 413 aaKnown RBP10.42□□□□□ -0.74
SDF2-208ENST00000589788 LENG8Q96PV6 779 aaPredicted RBP10.42□□□□□ -0.74
SDF2-208ENST00000589788 LGMNQ99538 433 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 TSGA10Q9BZW7 698 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 RUBCNLQ9H714 662 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 ERVMER34-1Q9H9K5 563 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 SPTBN2O15020 2390 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 CACNA1AO00555 2505 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 PCNX2A6NKB5 2137 aa10.42□□□□□ -0.74
SDF2-208ENST00000589788 POM121BA6NF01 834 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 A6NHS1 94 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 USP27XA6NNY8 438 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 KCNK1O00180 336 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 TRAFD1O14545 582 aaPredicted RBP10.41□□□□□ -0.74
SDF2-208ENST00000589788 HTRA2O43464 458 aaPredicted RBP10.41□□□□□ -0.74
SDF2-208ENST00000589788 KRT86O43790 486 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 JCHAINP01591 159 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 PRKCGP05129 697 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 ITGAVP06756 1048 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 ELFN1P0C7U0 828 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 C6P13671 934 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 CA4P22748 312 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 MSNP26038 577 aaKnown RBP10.41□□□□□ -0.74
SDF2-208ENST00000589788 CTNNA1P35221 906 aaKnown RBP10.41□□□□□ -0.74
SDF2-208ENST00000589788 MMP12P39900 470 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 CETN2P41208 172 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 GRK6P43250 576 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 RABIFP47224 123 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 MARCKSL1P49006 195 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 NR2C2P49116 596 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 LIG3P49916 1009 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 SIM1P81133 766 aaPredicted RBP10.41□□□□□ -0.74
SDF2-208ENST00000589788 SEMG2Q02383 582 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 DSC2Q02487 901 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 TRAF2Q12933 501 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 LRRC14Q15048 493 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 TAZQ16635 292 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.41□□□□□ -0.74
SDF2-208ENST00000589788 ARMC12Q5T9G4 340 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 N4BP2L1Q5TBK1 243 aaPredicted RBP10.41□□□□□ -0.74
SDF2-208ENST00000589788 CCDC181Q5TID7 509 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 KYAT3Q6YP21 454 aaKnown RBP10.41□□□□□ -0.74
SDF2-208ENST00000589788 SYCE1Q8N0S2 351 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 NDUFAF2Q8N183 169 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 KRT35Q92764 455 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 P3H4Q92791 437 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 MRRFQ96E11 262 aaKnown RBP10.41□□□□□ -0.74
SDF2-208ENST00000589788 BMFQ96LC9 184 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 CAMK1GQ96NX5 476 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 KLF6Q99612 283 aaPredicted RBP10.41□□□□□ -0.74
SDF2-208ENST00000589788 BRD8Q9H0E9 1235 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 SEPT10Q9P0V9 454 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 PHTF1Q9UMS5 762 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms