RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 PCDHB9Q9Y5E1 797 aa16.04■□□□□ 0.16
CSNK1D-223ENST00000584472 SLCO1B1Q9Y6L6 691 aa16.04■□□□□ 0.16
CSNK1D-223ENST00000584472 TRPM6Q9BX84 2022 aa16.04■□□□□ 0.16
CSNK1D-223ENST00000584472 LOC285095A0A1B0GVY8 99 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 A0A1W2PQ67 120 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 NEMP1O14524 444 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 RIOK3O14730 519 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 SPINT1O43278 529 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 SUN1O94901 812 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 PRLP01236 227 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 EPOP01588 193 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 APRTP07741 180 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 PDHA1P08559 390 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 TPSB2P20231 275 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 XPAP23025 273 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 MAT2AP31153 395 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 ADRA1AP35348 466 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 MAGEA6P43360 314 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 LMAN1P49257 510 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 TERF1P54274 439 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 POLR2LP62875 67 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 CDK18Q07002 472 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 ELP6Q0PNE2 266 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 KCNJ11Q14654 390 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 TPSAB1Q15661 275 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 UGP2Q16851 508 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 ARMC12Q5T9G4 340 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 N4BP2L1Q5TBK1 243 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 DUPD1Q68J44 220 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 IFT43Q96FT9 208 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 SERAC1Q96JX3 654 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 FSD1LQ9BXM9 530 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 TRIM31Q9BZY9 425 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 LRRC40Q9H9A6 602 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 EIF2B3Q9NR50 452 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 DNAAF2Q9NVR5 837 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 ANGPTL2Q9UKU9 493 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 ZFR2Q9UPR6 939 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 CEP295Q9C0D2 2601 aa16.03■□□□□ 0.16
CSNK1D-223ENST00000584472 MYLKQ15746 1914 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 TCRBV7S3A2A0A539 114 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 PRAMEF26H0Y7S4 382 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 VILLO15195 856 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 HEXIM1O94992 359 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 AGTP01019 485 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 RPL21P46778 160 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 NOVA1P51513 510 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 GRIK2Q13002 908 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 OLIG2Q13516 323 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 SPARCL1Q14515 664 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 RNASEH2BQ5TBB1 312 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 IZUMO3Q5VZ72 239 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 SEL1L3Q68CR1 1132 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 ERAP2Q6P179 960 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 IL27RAQ6UWB1 636 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 RANBP10Q6VN20 620 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 KDELC2Q7Z4H8 507 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 PCGF5Q86SE9 256 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 IQCHQ86VS3 1027 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 PPIL6Q8IXY8 311 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 NAT8LQ8N9F0 302 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 PIH1D2Q8WWB5 315 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 ASB12Q8WXK4 309 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 SKA1Q96BD8 255 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 SNF8Q96H20 258 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 SLC6A18Q96N87 628 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 FICDQ9BVA6 458 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 C1QTNF2Q9BXJ5 285 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 DPH5Q9H2P9 285 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 SLC32A1Q9H598 525 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 PCDH12Q9NPG4 1184 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 SNX24Q9Y343 169 aa16.02■□□□□ 0.16
CSNK1D-223ENST00000584472 ASCC3Q8N3C0 2202 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 BHMG1C9JSJ3 638 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 USP12O75317 370 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 TMEM63AO94886 807 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 SEC31AO94979 1220 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 NDST3O95803 873 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 CPP00450 1065 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 ATXN1LP0C7T5 689 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 HLA-DPA1P20036 260 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 CD38P28907 300 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 MMP12P39900 470 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 TNNT3P45378 269 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 CSNK1EP49674 416 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 ATXN3P54252 364 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 DRG2P55039 364 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 RPL26P61254 145 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 CDK16Q00536 496 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 OVGP1Q12889 678 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 GALNT3Q14435 633 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 SLC1A5Q15758 541 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 TMEM52BQ4KMG9 183 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 ANKRD22Q5VYY1 191 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 PSAPL1Q6NUJ1 521 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 PIP4P1Q86T03 277 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 LINC00523Q86TU6 105 aa16.01■□□□□ 0.15
CSNK1D-223ENST00000584472 PAF1Q8N7H5 531 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms