RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 C17orf82Q86X59 251 aaPredicted RBP10.62□□□□□ -0.71
RFFL-209ENST00000581265 JAMLQ86YT9 394 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 SLITRK4Q8IW52 837 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 SFTPA2Q8IWL1 248 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 PELI3Q8N2H9 469 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 CCL4L1Q8NHW4 92 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 GPBAR1Q8TDU6 330 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 COQ10AQ96MF6 247 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 CMKLR1Q99788 373 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 TEX101Q9BY14 249 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 WDR26Q9H7D7 661 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 CYP4F12Q9HCS2 524 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 CWC15Q9P013 229 aaKnown RBP10.62□□□□□ -0.71
RFFL-209ENST00000581265 PISDQ9UG56 409 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 LOXL2Q9Y4K0 774 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 RNF215Q9Y6U7 377 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 LRP4O75096 1905 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 PRSS38A1L453 326 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 A8MX80 341 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 TMCO5BA8MYB1 307 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 SOCS5O75159 536 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 CPNE6O95741 557 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 PEX11BO96011 259 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 FTLP02792 175 aaPredicted RBP10.61□□□□□ -0.71
RFFL-209ENST00000581265 FUCA1P04066 466 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 ITGB2P05107 769 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 LIPCP11150 499 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 MYCLP1P12525 358 aaPredicted RBP10.61□□□□□ -0.71
RFFL-209ENST00000581265 CCNB1P14635 433 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 CR2P20023 1033 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 HSPA9P38646 679 aaKnown RBP10.61□□□□□ -0.71
RFFL-209ENST00000581265 DPYSQ14117 519 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 STX1AQ16623 288 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 CLPPQ16740 277 aaPredicted RBP10.61□□□□□ -0.71
RFFL-209ENST00000581265 LINC00303Q3SY05 128 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 PPP6R3Q5H9R7 873 aaPredicted RBP10.61□□□□□ -0.71
RFFL-209ENST00000581265 TMCO4Q5TGY1 634 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 USP53Q70EK8 1073 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 TMPRSS9Q7Z410 1059 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 ZNF438Q7Z4V0 828 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 DTX1Q86Y01 620 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 NRROSQ86YC3 692 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 TP53INP2Q8IXH6 220 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 PAF1Q8N7H5 531 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 EXD3Q8N9H8 876 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 KIAA1524Q8TCG1 905 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 SGF29Q96ES7 293 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 TRIM7Q9C029 511 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 SPATS2LQ9NUQ6 558 aaKnown RBP10.61□□□□□ -0.71
RFFL-209ENST00000581265 TRNAU1APQ9NX07 287 aaKnown RBP10.61□□□□□ -0.71
RFFL-209ENST00000581265 AIPL1Q9NZN9 384 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 B4GALT6Q9UBX8 382 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 PCDHGC4Q9Y5F7 938 aa10.61□□□□□ -0.71
RFFL-209ENST00000581265 TLN1Q9Y490 2541 aaKnown RBP10.61□□□□□ -0.71
RFFL-209ENST00000581265 PRAMEF33A0A0G2JMD5 474 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 A0A1W2PQC6 194 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 B4DGG1 531 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.6□□□□□ -0.71
RFFL-209ENST00000581265 TEX33O43247 280 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 ATMINO43313 823 aaPredicted RBP10.6□□□□□ -0.71
RFFL-209ENST00000581265 SUV39H1O43463 412 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 MAFKO60675 156 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 PRAMEF10O60809 474 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 LRCH4O75427 683 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 HEXIM1O94992 359 aaKnown RBP10.6□□□□□ -0.71
RFFL-209ENST00000581265 FGF1P05230 155 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 CEACAM5P06731 702 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 SFTPCP11686 197 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 ITIH1P19827 911 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 NFKBIAP25963 317 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 CD82P27701 267 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 TEAD1P28347 426 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 PCK1P35558 622 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 ETV5P41161 510 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 NR1D2Q14995 579 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 CNGA3Q16281 694 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 DPYSL2Q16555 572 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 BOLA3Q53S33 107 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 RALGPS1Q5JS13 557 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 TMEM164Q5U3C3 297 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 PIM3Q86V86 326 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 USP7Q93009 1102 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 SCRN2Q96FV2 425 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 NUDCD1Q96RS6 583 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 GSDMCQ9BYG8 508 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 FRMD8Q9BZ67 464 aaPredicted RBP10.6□□□□□ -0.71
RFFL-209ENST00000581265 SEMA6CQ9H3T2 930 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 HAUS4Q9H6D7 363 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 ZWILCHQ9H900 591 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 CARS2Q9HA77 564 aaKnown RBP10.6□□□□□ -0.71
RFFL-209ENST00000581265 NOD2Q9HC29 1040 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 RTN4Q9NQC3 1192 aaKnown RBP10.6□□□□□ -0.71
RFFL-209ENST00000581265 PHPT1Q9NRX4 125 aaPredicted RBP10.6□□□□□ -0.71
RFFL-209ENST00000581265 SEPT10Q9P0V9 454 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 CNOT8Q9UFF9 292 aaKnown RBP10.6□□□□□ -0.71
RFFL-209ENST00000581265 MOSPD1Q9UJG1 213 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 PHTF1Q9UMS5 762 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 PPIL1Q9Y3C6 166 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 PCDHB11Q9Y5F2 797 aa10.6□□□□□ -0.71
RFFL-209ENST00000581265 SCN8AQ9UQD0 1980 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms