RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ADGRE3Q9BY15 652 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 BHLHE41Q9C0J9 482 aaPredicted RBP8.06□□□□□ -1.12
COPS3-215ENST00000578317 CD320Q9NPF0 282 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 PRSS16Q9NQE7 514 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 CACNA2D2Q9NY47 1150 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 UBP1Q9NZI7 540 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 EVLQ9UI08 416 aaPredicted RBP8.06□□□□□ -1.12
COPS3-215ENST00000578317 A0A1W2PQF6 199 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 TSPAN11A1L157 253 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 SDR42E2A6NKP2 422 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 ADAM23O75077 832 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 SIN3BO75182 1162 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 GJB3O75712 270 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 PGLSO95336 258 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 AGTP01019 485 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 FGF1P05230 155 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 ATXN1LP0C7T5 689 aaKnown RBP8.05□□□□□ -1.12
COPS3-215ENST00000578317 CD72P21854 359 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 PRKCHP24723 683 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 GRIA1P42261 906 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 TNNT3P45378 269 aaPredicted RBP8.05□□□□□ -1.12
COPS3-215ENST00000578317 SUOXP51687 545 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 ZXDAP98168 799 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 CTBSQ01459 385 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 TRAF2Q12933 501 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 LRRC32Q14392 662 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 SLMAPQ14BN4 828 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 DNAJC21Q5F1R6 531 aaKnown RBP8.05□□□□□ -1.12
COPS3-215ENST00000578317 EOGTQ5NDL2 527 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 ARMC12Q5T9G4 340 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 BRAT1Q6PJG6 821 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 GDPD4Q6W3E5 623 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 CENPUQ71F23 418 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 ZNF534Q76KX8 674 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 RAB44Q7Z6P3 723 aaPredicted RBP8.05□□□□□ -1.12
COPS3-215ENST00000578317 CAMK1DQ8IU85 385 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 RYBPQ8N488 228 aaPredicted RBP8.05□□□□□ -1.12
COPS3-215ENST00000578317 TAB3Q8N5C8 712 aaPredicted RBP8.05□□□□□ -1.12
COPS3-215ENST00000578317 TMEM102Q8N9M5 508 aaPredicted RBP8.05□□□□□ -1.12
COPS3-215ENST00000578317 CHST14Q8NCH0 376 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 IPMKQ8NFU5 416 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 PIH1D2Q8WWB5 315 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 OR8D1Q8WZ84 308 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 CLDN23Q96B33 292 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 SIGLEC10Q96LC7 697 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 LYSMD1Q96S90 227 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 NAT9Q9BTE0 207 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 FSD1LQ9BXM9 530 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 TXLNGYQ9BZA5 131 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 IL22Q9GZX6 179 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 RSPH9Q9H1X1 276 aaPredicted RBP8.05□□□□□ -1.12
COPS3-215ENST00000578317 NEUROG2Q9H2A3 272 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 CD248Q9HCU0 757 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 LTB4R2Q9NPC1 389 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 BFARQ9NZS9 450 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 IL36AQ9UHA7 158 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 FBXL21Q9UKT6 434 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 CA14Q9ULX7 337 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 PHTF1Q9UMS5 762 aa8.05□□□□□ -1.12
COPS3-215ENST00000578317 ANTXRLA6NF34 631 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 FAM170BA6NMN3 283 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 SYNCRIPO60506 623 aaKnown RBP8.04□□□□□ -1.12
COPS3-215ENST00000578317 ATG13O75143 517 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 LEFTY1O75610 366 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 EPHX1P07099 455 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 CTSLP07711 333 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 PDHA1P08559 390 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 CELA3AP09093 270 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 MYBL2P10244 700 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 HLA-EP13747 358 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 PSMA3P25788 255 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 ZBTB16Q05516 673 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 LAMB3Q13751 1172 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 SPARCL1Q14515 664 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 STARD3Q14849 445 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 MAP9Q49MG5 647 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 C2orf27AQ580R0 203 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 ZNF805Q5CZA5 627 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 SIRPB2Q5JXA9 342 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 RNFT1Q5M7Z0 435 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 SPDYCQ5MJ68 293 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 FNBP1LQ5T0N5 605 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 FAM46CQ5VWP2 391 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 CYS1Q717R9 158 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.04□□□□□ -1.12
COPS3-215ENST00000578317 NDUFAF2Q8N183 169 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 STK40Q8N2I9 435 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.04□□□□□ -1.12
COPS3-215ENST00000578317 DNAAF3Q8N9W5 541 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 OR52K1Q8NGK4 314 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 OR6K2Q8NGY2 324 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 OR2T3Q8NH03 318 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 BRSK1Q8TDC3 778 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 AENQ8WTP8 325 aaKnown RBP8.04□□□□□ -1.12
COPS3-215ENST00000578317 EDAQ92838 391 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 PEX13Q92968 403 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 CAVIN3Q969G5 261 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 SCRN2Q96FV2 425 aa8.04□□□□□ -1.12
COPS3-215ENST00000578317 EAF1Q96JC9 268 aaPredicted RBP8.04□□□□□ -1.12
COPS3-215ENST00000578317 NECAB3Q96P71 396 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms