RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 H3BMM5 538 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 TRIM24O15164 1050 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 AP1G1O43747 822 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 NRP2O60462 931 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 ADAMTS4O75173 837 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 WISP3O95389 354 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-212ENST00000573126 GLP2RO95838 553 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 CLPTM1O96005 669 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 CD1DP15813 335 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 SLC7A2P52569 658 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 RPL26P61254 145 aaKnown RBP11.23□□□□□ -0.61
RPAIN-212ENST00000573126 HERVK_113P63132 956 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 MYBPC1Q00872 1141 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 KIF19Q2TAC6 998 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 LARP4Q71RC2 724 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPAIN-212ENST00000573126 TMEM126BQ8IUX1 230 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 DCP1BQ8IZD4 617 aaKnown RBP11.23□□□□□ -0.61
RPAIN-212ENST00000573126 CFAP52Q8N1V2 620 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 TEX26Q8N6G2 289 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 CATSPER1Q8NEC5 780 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 FBXO32Q969P5 355 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 LRCH3Q96II8 777 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 SLC45A3Q96JT2 553 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 KCNA7Q96RP8 456 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 SLC25A23Q9BV35 468 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 ERVK-6Q9BXR3 956 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 FNIP2Q9P278 1114 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 LOC285095A0A1B0GVY8 99 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 SLC12A8A0AV02 714 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 CCDC162PA2VCL2 907 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MANSC4A6NHS7 340 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 CD3EAPO15446 510 aaKnown RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 OAZ2O95190 189 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 TFAP2AP05549 437 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 TIAL1Q01085 375 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■■■■□ 23
RPAIN-212ENST00000573126 GALNT1Q10472 559 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 TAF10Q12962 218 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 ZNF235Q14590 738 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 OR4D1Q15615 310 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 FAM45BPQ6NSW5 357 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 RTN4RL1Q86UN2 441 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 RETREG3Q86VR2 466 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 FUNDC1Q8IVP5 155 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 ATP6V0D2Q8N8Y2 350 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 FAM45AQ8TCE6 357 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 NAT14Q8WUY8 206 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 NMD3Q96D46 503 aaKnown RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 GRIP2Q9C0E4 1043 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 POLR1EQ9GZS1 481 aaKnown RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 AKTIPQ9H8T0 292 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MID1IP1Q9NPA3 183 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 LAMA3Q16787 3333 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MYO16Q9Y6X6 1858 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 IGLV3-10A0A075B6K4 115 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 A0A0D9SEW6 157 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 A0A1B0GTL3 188 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 NR5A2O00482 541 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 SEPT4O43236 478 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 CDK14O94921 469 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 ZNF37AP17032 561 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 FLT3LGP49771 235 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 STX1BP61266 288 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 RHDQ02161 417 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 SERINC3Q13530 473 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 NFE2Q16621 373 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MGAT5BQ3V5L5 792 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MTX3Q5HYI7 312 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 C6orf10Q5SRN2 563 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 AMIGO2Q86SJ2 522 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 DDIASQ8IXT1 998 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 L3HYPDHQ96EM0 354 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 TRMOQ9BU70 441 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 CROTQ9UKG9 612 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 FAM50BQ9Y247 325 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 PCDHB5Q9Y5E4 795 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MIA3Q5JRA6 1907 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 A0A1B0GTW7 788 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 UBA6A0AVT1 1052 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 C7orf72A4D263 438 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 PIP5K1BO14986 540 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 C8BP07358 591 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MTHFD2P13995 350 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 ZNF26P17031 533 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 FDXRP22570 491 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 PSMD8P48556 350 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 DSC1Q08554 894 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 UGT3A2Q3SY77 523 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 VPS26BQ4G0F5 336 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 CTXN3Q4LDR2 81 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 MRNIPQ6NTE8 343 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 GALNT7Q86SF2 657 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 HERC6Q8IVU3 1022 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 METTL25Q8N6Q8 603 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 FAM110BQ8TC76 370 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 SLCO4A1Q96BD0 722 aa11.22□□□□□ -0.61
RPAIN-212ENST00000573126 PPWD1Q96BP3 646 aaKnown RBP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 FUBP3Q96I24 572 aaKnown RBP eCLIP11.22□□□□□ -0.61
RPAIN-212ENST00000573126 EXOC2Q96KP1 924 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms