RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 TENM4Q6N022 2769 aa9.33□□□□□ -0.92
NPLOC4-210ENST00000572824 A0A0U1RQS6 177 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 CPED1A4D0V7 1026 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 LGALS16A8MUM7 142 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 C9orf172C9J069 976 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 BUB1BO60566 1050 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 USP12O75317 370 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 GSRP00390 522 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 CSF2P04141 144 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 C1SP09871 688 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 KRT3P12035 628 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 EPHB2P29323 1055 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 ETFBP38117 255 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 NSFP46459 744 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 MAPKAPK2P49137 400 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 SNX16P57768 344 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 PFN3P60673 137 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 RPS21P63220 83 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 GABREP78334 506 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 NRG1Q02297 640 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 TLE3Q04726 772 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 OVGP1Q12889 678 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 SRSF6Q13247 344 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 PWP1Q13610 501 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 LRRC14Q15048 493 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 POLD3Q15054 466 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 KLHL40Q2TBA0 621 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 MYLK3Q32MK0 819 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 TBC1D25Q3MII6 688 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 ZNF805Q5CZA5 627 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 C3orf38Q5JPI3 329 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 KIAA1161Q6NSJ0 714 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 DNAJC24Q6P3W2 148 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 ZNF783Q6ZMS7 281 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 ARCQ7LC44 396 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 STRADAQ7RTN6 431 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 EFL1Q7Z2Z2 1120 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 B3GNT8Q7Z7M8 397 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 PARGQ86W56 976 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 PHF13Q86YI8 300 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 CPNE8Q86YQ8 564 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 SLC35F3Q8IY50 421 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 AOPEPQ8N6M6 819 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 RTL3Q8N8U3 475 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 KYQ8NBH2 561 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 PLA2G15Q8NCC3 412 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 C3orf20Q8ND61 904 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 CENPTQ96BT3 561 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 ATXN7L3BQ96GX2 97 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 PPP1R16AQ96I34 528 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 CCDC114Q96M63 670 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 TMEM74Q96NL1 305 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 FCRL3Q96P31 734 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 SMIM14Q96QK8 99 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 SELENOOQ9BVL4 669 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 SEMA4CQ9C0C4 833 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 PDFQ9HBH1 243 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 CPNE5Q9HCH3 593 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 NLGN3Q9NZ94 848 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 SIRPGQ9P1W8 387 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 FZD10Q9ULW2 581 aa9.32□□□□□ -0.92
NPLOC4-210ENST00000572824 COL6A6A6NMZ7 2263 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 NEMP1O14524 444 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 AQP9O43315 295 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 KDELR3O43731 214 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 AP1G1O43747 822 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 GM2AP17900 193 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 STAT1P42224 750 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 GSK3AP49840 483 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 ADKP55263 362 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 GSCP56915 257 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 RHOAP61586 193 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 UBXN1Q04323 297 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 NEK5Q6P3R8 708 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 GDPD4Q6W3E5 623 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 ACAD11Q709F0 780 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 SLFN11Q7Z7L1 901 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 ZNF677Q86XU0 584 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 CAMK1DQ8IU85 385 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 ARHGAP12Q8IWW6 846 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 NEK11Q8NG66 645 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 PCDH19Q8TAB3 1148 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 MAPK15Q8TD08 544 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 TSACCQ96A04 125 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 NTAN1Q96AB6 310 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 PDXPQ96GD0 296 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 PRR11Q96HE9 360 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 PPP1R9BQ96SB3 815 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 AGPAT1Q99943 283 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 MAGEH1Q9H213 219 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 SYNDIG1Q9H7V2 258 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 PCDH12Q9NPG4 1184 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 ASCL3Q9NQ33 180 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 APOBEC3BQ9UH17 382 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 LIMA1Q9UHB6 759 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 PCSK1NQ9UHG2 260 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 SATB2Q9UPW6 733 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 OR1A2Q9Y585 309 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms