RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 POM121BA6NF01 834 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 A6NNZ2 444 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 SLC31A1O15431 190 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 PHF2O75151 1096 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 RECQL5O94762 991 aaPredicted RBP13.43□□□□□ -0.26
CDH1-204ENST00000562118 AP2A1O95782 977 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 SOD1P00441 154 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 CTPS1P17812 591 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 ENGP17813 658 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 PSMA3P25788 255 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 FDFT1P37268 417 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 MAGEA6P43360 314 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 CSNK1EP49674 416 aaKnown RBP13.43□□□□□ -0.26
CDH1-204ENST00000562118 DCDC1P59894 354 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 YPEL5P62699 121 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 MTM1Q13496 603 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 GALNT3Q14435 633 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 IRF4Q15306 451 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 TEAD4Q15561 434 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 CCDC6Q16204 474 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 DBX2Q6ZNG2 339 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 ARHGEF18Q6ZSZ5 1173 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 ZNF572Q7Z3I7 529 aaPredicted RBP13.43□□□□□ -0.26
CDH1-204ENST00000562118 HSD11B1LQ7Z5J1 315 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 SPATS2Q86XZ4 545 aaKnown RBP13.43□□□□□ -0.26
CDH1-204ENST00000562118 DCP2Q8IU60 420 aaKnown RBP13.43□□□□□ -0.26
CDH1-204ENST00000562118 TTC30BQ8N4P2 665 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDH1-204ENST00000562118 ATL2Q8NHH9 583 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 IFT43Q96FT9 208 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 NUSAP1Q9BXS6 441 aaKnown RBP13.43□□□□□ -0.26
CDH1-204ENST00000562118 MIR1-1HGQ9H1L0 117 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 TRABDQ9H4I3 376 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 FZD3Q9NPG1 666 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 EIF2B3Q9NR50 452 aaKnown RBP13.43□□□□□ -0.26
CDH1-204ENST00000562118 MBNL1Q9NR56 388 aaKnown RBP13.43□□□□□ -0.26
CDH1-204ENST00000562118 SMARCAL1Q9NZC9 954 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 PAK5Q9P286 719 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 ZNF148Q9UQR1 794 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 ANKRD6Q9Y2G4 727 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 COQ6Q9Y2Z9 468 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 SPO11Q9Y5K1 396 aa13.43□□□□□ -0.26
CDH1-204ENST00000562118 ASCC3Q8N3C0 2202 aaKnown RBP13.43□□□□□ -0.26
CDH1-204ENST00000562118 A0A1B0GVT2 93 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 H0Y8X5 98 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 TLR4O00206 839 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 PDE2AO00408 941 aaPredicted RBP13.42□□□□□ -0.26
CDH1-204ENST00000562118 SYPP08247 313 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 RPL22P35268 128 aaKnown RBP13.42□□□□□ -0.26
CDH1-204ENST00000562118 HMGCLP35914 325 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 COILP38432 576 aaPredicted RBP13.42□□□□□ -0.26
CDH1-204ENST00000562118 RABIFP47224 123 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 KCNJ1P48048 391 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 RXRGP48443 463 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 EPHB1P54762 984 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 SEMG2Q02383 582 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 LMNB2Q03252 620 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 SGCGQ13326 291 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 SNX1Q13596 522 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 PRPSAP1Q14558 356 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 LRRC14Q15048 493 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 PCSK7Q16549 785 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 KIF19Q2TAC6 998 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 HENMT1Q5T8I9 393 aaKnown RBP13.42□□□□□ -0.26
CDH1-204ENST00000562118 IL27RAQ6UWB1 636 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 ALYREFQ86V81 257 aaKnown RBP13.42□□□□□ -0.26
CDH1-204ENST00000562118 NRSN1Q8IZ57 195 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 PELI3Q8N2H9 469 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 OR13H1Q8NG92 308 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 KLK6Q92876 244 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 CDH19Q9H159 772 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 LRRC40Q9H9A6 602 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 HACD3Q9P035 362 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 PCYOX1Q9UHG3 505 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 CA5BQ9Y2D0 317 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 ZNF711Q9Y462 761 aa13.42□□□□□ -0.26
CDH1-204ENST00000562118 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.42□□□□□ -0.26
CDH1-204ENST00000562118 CABIN1Q9Y6J0 2220 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 A0A0U1RQS6 177 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 FPGTO14772 594 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 TM4SF5O14894 197 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 PSMD3O43242 534 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 DFNA5O60443 496 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 MAGEC1O60732 1142 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 CLDN7O95471 211 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 AGTP01019 485 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 TUBB4AP04350 444 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 ETS1P14921 441 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 ETV3P41162 512 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 CHRNA4P43681 627 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 SPINT3P49223 89 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 CLDN2P57739 230 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 KIAA1024LP59773 190 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 ARHGAP8P85298 464 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 ARHGEF7Q14155 803 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 STAT4Q14765 748 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 SHBQ15464 509 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 TPRG1LQ5T0D9 272 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 LAYNQ6UX15 382 aa13.41□□□□□ -0.26
CDH1-204ENST00000562118 KANSL1Q7Z3B3 1105 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms