RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 IRF9Q00978 393 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 PDGFRLQ15198 375 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 CCDC153Q494R4 210 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 FASTKD1Q53R41 847 aaKnown RBP23.53■■□□□ 1.36
TM2D3-209ENST00000560013 Q6ZVU0 165 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 CEP97Q8IW35 865 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 TRIM42Q8IWZ5 723 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 SORCS1Q8WY21 1168 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 GRAMD1AQ96CP6 724 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 MECRQ9BV79 373 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 CIPCQ9C0C6 399 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 ZNF358Q9NW07 568 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 IL17CQ9P0M4 197 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 PHTF1Q9UMS5 762 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 PKP3Q9Y446 797 aa23.53■■□□□ 1.36
TM2D3-209ENST00000560013 SNX3O60493 162 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 EDF1O60869 148 aaKnown RBP23.52■■□□□ 1.36
TM2D3-209ENST00000560013 PROCP04070 461 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 BPGMP07738 259 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 SLC35E2BP0CK96 405 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 VASPP50552 380 aaPredicted RBP23.52■■□□□ 1.36
TM2D3-209ENST00000560013 TAS2R39P59534 338 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 IRX4P78413 519 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 SEMA3AQ14563 771 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 RBM20Q5T481 1227 aaKnown RBP23.52■■□□□ 1.36
TM2D3-209ENST00000560013 CES5AQ6NT32 575 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 LYSMD3Q7Z3D4 306 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 LCA5Q86VQ0 697 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 NUDCD3Q8IVD9 361 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 E2F7Q96AV8 911 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 ECHDC3Q96DC8 303 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 ZNF641Q96N77 438 aaPredicted RBP23.52■■□□□ 1.36
TM2D3-209ENST00000560013 ZNF576Q9H609 170 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 ZDHHC6Q9H6R6 413 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 ECT2Q9H8V3 914 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 BPIFA1Q9NP55 256 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 SLC8A2Q9UPR5 921 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 ACOT9Q9Y305 439 aa23.52■■□□□ 1.36
TM2D3-209ENST00000560013 A0A0U1RQS6 177 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 OTOL1A6NHN0 477 aaPredicted RBP23.51■■□□□ 1.35
TM2D3-209ENST00000560013 H7C0S8 307 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 ASLP04424 464 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 SRPRAP08240 638 aaKnown RBP23.51■■□□□ 1.35
TM2D3-209ENST00000560013 COL6A2P12110 1019 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 BGNP21810 368 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 RECQLP46063 649 aaPredicted RBP23.51■■□□□ 1.35
TM2D3-209ENST00000560013 STC1P52823 247 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 TYSND1Q2T9J0 566 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 VITQ6UXI7 678 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 OR2A12Q8NGT7 310 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 FRS2Q8WU20 508 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 SCG3Q8WXD2 468 aaKnown RBP23.51■■□□□ 1.35
TM2D3-209ENST00000560013 NDNQ99608 321 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 CLEC1BQ9P126 229 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 SIRPGQ9P1W8 387 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 FKBPLQ9UIM3 349 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 WASH3PC4AMC7 463 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 KLF11O14901 512 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 DLDP09622 509 aaKnown RBP23.51■■□□□ 1.35
TM2D3-209ENST00000560013 PMLP29590 882 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 PGGT1BP53609 377 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 DBN1Q16643 649 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 GAB4Q2WGN9 574 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 ZSWIM9Q86XI8 627 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 EID2BQ96D98 161 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 TSNARE1Q96NA8 513 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 C1QTNF1Q9BXJ1 281 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 ZFYVE1Q9HBF4 777 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 CORO1CQ9ULV4 474 aaPredicted RBP23.51■■□□□ 1.35
TM2D3-209ENST00000560013 CRYL1Q9Y2S2 319 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 STARD13Q9Y3M8 1113 aa23.51■■□□□ 1.35
TM2D3-209ENST00000560013 CAPN8A6NHC0 703 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 BMP1P13497 986 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 MC4RP32245 332 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 HNF1BP35680 557 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 FCHO2Q0JRZ9 810 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 HECTD2Q5U5R9 776 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 CGB2Q6NT52 195 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 CHST14Q8NCH0 376 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 CCDC197Q8NCU1 140 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 TCF12Q99081 682 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 C19orf43Q9BQ61 176 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 S1PR5Q9H228 398 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 HPS4Q9NQG7 708 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 INTS10Q9NVR2 710 aaKnown RBP23.5■■□□□ 1.35
TM2D3-209ENST00000560013 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.5■■□□□ 1.35
TM2D3-209ENST00000560013 DEC1Q9P2X7 70 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 VWA7Q9Y334 891 aa23.5■■□□□ 1.35
TM2D3-209ENST00000560013 A0A1W2PQ67 120 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 TTC34A8MYJ7 566 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 SP100P23497 879 aaPredicted RBP23.49■■□□□ 1.35
TM2D3-209ENST00000560013 SLC6A11P48066 632 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 ZNF460Q14592 562 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 PTPRNQ16849 979 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 ANKS4BQ8N8V4 417 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 RAB3IL1Q8TBN0 382 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 TSPAN17Q96FV3 270 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 LYSMD1Q96S90 227 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 MYADMQ96S97 322 aa23.49■■□□□ 1.35
TM2D3-209ENST00000560013 OLFM1Q99784 485 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms