RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 DPYSL3Q14195 570 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 KRT81Q14533 505 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 MESDQ14696 234 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 SHBQ15464 509 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 HADHQ16836 314 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 PRAMEF14Q5SWL7 426 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 DBX2Q6ZNG2 339 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZSWIM9Q86XI8 627 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 SPATS2Q86XZ4 545 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 WFDC8Q8IUA0 241 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 CACTIN-AS1Q8N1I8 211 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 MFSD2AQ8NA29 543 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 PCDH19Q8TAB3 1148 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 RFFLQ8WZ73 363 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 KLHDC7BQ96G42 594 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 MRFAP1L1Q96HT8 127 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 NSMCE3Q96MG7 304 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 CPEB1Q9BZB8 566 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLC32A1Q9H598 525 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 DKK3Q9UBP4 350 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 BTBD3Q9Y2F9 522 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 PCDHGB2Q9Y5G2 931 aa6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 TDRD6O60522 2096 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-204ENST00000558966 TSPAN11A1L157 253 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 TMEM110-MUSTN1A8MSY1 372 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 TLR4O00206 839 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 RAD51BO15315 384 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 FLRT2O43155 660 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PALMO75781 387 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 HNRNPA2B1P22626 353 aaKnown RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 CSNK1DP48730 415 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ARL4DP49703 201 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 CLDN2P57739 230 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 RPS21P63220 83 aaKnown RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 SIM1P81133 766 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 RAD51Q06609 339 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLC10A7Q0GE19 358 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 COL9A2Q14055 689 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 MPP2Q14168 576 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 RFTN1Q14699 578 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 TCEAL1Q15170 157 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 FBXW10Q5XX13 1052 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 NCBP2-AS2Q69YL0 99 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 KIAA1161Q6NSJ0 714 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 GCNT7Q6ZNI0 430 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 GK5Q6ZS86 529 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 SRLQ86TD4 932 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 IQCHQ86VS3 1027 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 CAMK1DQ8IU85 385 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 RHOT2Q8IXI1 618 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ATPAF2Q8N5M1 289 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PQLC3Q8N755 202 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 BAHD1Q8TBE0 780 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 RAPGEF5Q92565 580 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 RAB7BQ96AH8 199 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 FAF2Q96CS3 445 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 FEM1CQ96JP0 617 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZNF599Q96NL3 588 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PSKH2Q96QS6 385 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 TUBGCP5Q96RT8 1024 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ELF4Q99607 663 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZNF670Q9BS34 389 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 CINPQ9BW66 212 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 CALN1Q9BXU9 219 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLC17A9Q9BYT1 436 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 SOX17Q9H6I2 414 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 CAAP1Q9H8G2 361 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 GDF3Q9NR23 364 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 LCMT1Q9UIC8 334 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PCOLCE2Q9UKZ9 415 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 INTUQ9ULD6 942 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 TFR2Q9UP52 801 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 WASF3Q9UPY6 502 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 FREM2Q5SZK8 3169 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZZEF1O43149 2961 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 IGLON5A6NGN9 336 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 C3orf70A6NLC5 250 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 OIP5O43482 229 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 TSPAN6O43657 245 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PCDHGA12O60330 932 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 DFNA5O60443 496 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 LCA5LO95447 670 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 BPNT1O95861 308 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 TOP3BO95985 862 aaKnown RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PAK4O96013 591 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 CTSBP07858 339 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 KRT7P08729 469 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 THEGLP0DJG4 465 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 EPHA8P29322 1005 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 AKT2P31751 481 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 SERPINB6P35237 376 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 GALNT2Q10471 571 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 OVGP1Q12889 678 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 STAT4Q14765 748 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PAFAH1B3Q15102 231 aaKnown RBP6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 PDK2Q15119 407 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 POU4F3Q15319 338 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLC45A4Q5BKX6 768 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 ANKRD20A8PQ5CZ79 823 aa6.07□□□□□ -1.44
CTDSPL2-204ENST00000558966 KDM7AQ6ZMT4 941 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms