RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 ARL2BPQ9Y2Y0 163 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 USP15Q9Y4E8 981 aaPredicted RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 PLXNB2O15031 1838 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 SHISA3A0PJX4 238 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 SMIM23A6NLE4 172 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 ERI2A8K979 691 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 C1QTNF9BB2RNN3 333 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 KBTBD13C9JR72 458 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 PIK3R2O00459 728 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 CYB561D2O14569 222 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 FGF10O15520 208 aaPredicted RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 CA12O43570 354 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 SNX3O60493 162 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 OPHN1O60890 802 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 CSDE1O75534 798 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 EOMESO95936 686 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 ATP5BP06576 529 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 INHBAP08476 426 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 TYRP14679 529 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 PTPN1P18031 435 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 AOAHP28039 575 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 HOXD10P28358 340 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 SKIV2L2P42285 1042 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 SLCO1A2P46721 670 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 DYNLT1P63172 113 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 BASP1P80723 227 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 MRPS5P82675 430 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 ACTN3Q08043 901 aaPredicted RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 CCDC15Q0P6D6 951 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 IFT88Q13099 833 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 RAB30Q15771 203 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 SMTNL2Q2TAL5 461 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 TTC31Q49AM3 519 aaPredicted RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 KCNT1Q5JUK3 1230 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 RTP2Q5QGT7 225 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 TTC19Q6DKK2 380 aaPredicted RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 TXNRD3NBQ6F5E7 133 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 LIN54Q6MZP7 749 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 ZNF765Q7L2R6 523 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 CD163Q86VB7 1156 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 TTC30AQ86WT1 665 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 SIX6OS1Q8N1H7 587 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 THEM5Q8N1Q8 247 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 NAT16Q8N8M0 369 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 FAM71DQ8N9W8 422 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 KBTBD7Q8WVZ9 684 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 CDKL2Q92772 493 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 NT5C3BQ969T7 300 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 CNDP2Q96KP4 475 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 SNX22Q96L94 193 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 PPP1R10Q96QC0 940 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 VAT1Q99536 393 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 PRMT1Q99873 361 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 SNRNP25Q9BV90 132 aaKnown RBP7.3□□□□□ -1.24
MARK3-212ENST00000558223 ARHGAP39Q9C0H5 1083 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 TRABDQ9H4I3 376 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 NRDE2Q9H7Z3 1164 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 USP29Q9HBJ7 922 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 POPDC2Q9HBU9 364 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 RIC8BQ9NVN3 520 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 TMEM160Q9NX00 188 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 HMGXB4Q9UGU5 601 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 PRSS50Q9UI38 385 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 STARD13Q9Y3M8 1113 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 CDY2AQ9Y6F7 541 aa7.3□□□□□ -1.24
MARK3-212ENST00000558223 MAGEB16A2A368 324 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 FAM234BA2RU67 622 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 PRAMEF25A6NGN4 478 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 AP3D1O14617 1153 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 KCNN4O15554 427 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 SEPT4O43236 478 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 KRT38O76015 456 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 ZNF205O95201 554 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 CBX7O95931 251 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 ALBP02768 609 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 MT-ND3P03897 115 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 ITGA2BP08514 1039 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 ITGA5P08648 1049 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 ODC1P11926 461 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 ATP6V1B1P15313 513 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 TCF4P15884 667 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 EN2P19622 333 aaPredicted RBP7.29□□□□□ -1.24
MARK3-212ENST00000558223 CYP2B6P20813 491 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 IL4RP24394 825 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 CYP2F1P24903 491 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 CST5P28325 142 aaPredicted RBP7.29□□□□□ -1.24
MARK3-212ENST00000558223 SERPINB6P35237 376 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 GLUD2P49448 558 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 RGS7P49802 495 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 RASSF2P50749 326 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 COPAP53621 1224 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 HDAC4P56524 1084 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 HTRA4P83105 476 aaPredicted RBP7.29□□□□□ -1.24
MARK3-212ENST00000558223 COG7P83436 770 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 ZNF200P98182 395 aaPredicted RBP7.29□□□□□ -1.24
MARK3-212ENST00000558223 SCAPQ12770 1279 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 FRG1Q14331 258 aaKnown RBP7.29□□□□□ -1.24
MARK3-212ENST00000558223 KCNJ11Q14654 390 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 ARHGEF6Q15052 776 aa7.29□□□□□ -1.24
MARK3-212ENST00000558223 PDK4Q16654 411 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms