RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SEPT3Q9UH03 358 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 MOSPD1Q9UJG1 213 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 PCDHGC4Q9Y5F7 938 aa15.97■□□□□ 0.15
SCFD1-224ENST00000557713 PIEZO2Q9H5I5 2752 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 A0A1W2PQ67 120 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 AGRPO00253 132 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 PRPSAP2O60256 369 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 LRCH4O75427 683 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 PEX11BO96011 259 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 CEACAM5P06731 702 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 MYCLP1P12525 358 aaPredicted RBP15.96■□□□□ 0.15
SCFD1-224ENST00000557713 ATP1A3P13637 1013 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 CCNB1P14635 433 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 CR2P20023 1033 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 CNGA3Q16281 694 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 TMCO4Q5TGY1 634 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 ZFAND4Q86XD8 727 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 DTX1Q86Y01 620 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 PGBD5Q8N414 524 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 PAF1Q8N7H5 531 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 KIAA1524Q8TCG1 905 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 USP7Q93009 1102 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 B3GNT4Q9C0J1 378 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 KCTD5Q9NXV2 234 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 FOXJ2Q9P0K8 574 aa15.96■□□□□ 0.15
SCFD1-224ENST00000557713 C9orf172C9J069 976 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 PYCARD-AS1I3L0S3 204 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 SOCS5O75159 536 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 HEXIM1O94992 359 aaKnown RBP15.95■□□□□ 0.14
SCFD1-224ENST00000557713 CPNE6O95741 557 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 FTLP02792 175 aaPredicted RBP15.95■□□□□ 0.14
SCFD1-224ENST00000557713 ITGB2P05107 769 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 GZMAP12544 262 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 OR1D5P58170 312 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 NR1D2Q14995 579 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 C16orf72Q14CZ0 275 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 STX1AQ16623 288 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 ZNF574Q6ZN55 896 aaPredicted RBP15.95■□□□□ 0.14
SCFD1-224ENST00000557713 ZNF438Q7Z4V0 828 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 PIM3Q86V86 326 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 NUS1Q96E22 293 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 NUDCD1Q96RS6 583 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 FRMD8Q9BZ67 464 aaPredicted RBP15.95■□□□□ 0.14
SCFD1-224ENST00000557713 CARS2Q9HA77 564 aaKnown RBP15.95■□□□□ 0.14
SCFD1-224ENST00000557713 RDH14Q9HBH5 336 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 TRNAU1APQ9NX07 287 aaKnown RBP15.95■□□□□ 0.14
SCFD1-224ENST00000557713 SEPT10Q9P0V9 454 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 ST14Q9Y5Y6 855 aa15.95■□□□□ 0.14
SCFD1-224ENST00000557713 A0A1W2PQC6 194 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 LRRC53A6NM62 1247 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 SLC28A2O43868 658 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 MAFKO60675 156 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 VIPR1P32241 457 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 HSPA9P38646 679 aaKnown RBP15.94■□□□□ 0.14
SCFD1-224ENST00000557713 ETV3P41162 512 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 MAPK10P53779 464 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 MAZP56270 477 aaKnown RBP15.94■□□□□ 0.14
SCFD1-224ENST00000557713 CLPPQ16740 277 aaPredicted RBP15.94■□□□□ 0.14
SCFD1-224ENST00000557713 MANEAQ5SRI9 462 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 PHF19Q5T6S3 580 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 ZNF571Q7Z3V5 609 aaPredicted RBP15.94■□□□□ 0.14
SCFD1-224ENST00000557713 HSD11B1LQ7Z5J1 315 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 HEATR4Q86WZ0 1026 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 ZDHHC1Q8WTX9 485 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 PTCD2Q8WV60 388 aaKnown RBP15.94■□□□□ 0.14
SCFD1-224ENST00000557713 EXTL1Q92935 676 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 DTD2Q96FN9 168 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 GSDMCQ9BYG8 508 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 HAUS4Q9H6D7 363 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 NOD2Q9HC29 1040 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 PHPT1Q9NRX4 125 aaPredicted RBP15.94■□□□□ 0.14
SCFD1-224ENST00000557713 ETNK2Q9NVF9 386 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 AIPL1Q9NZN9 384 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 TAAR2Q9P1P5 351 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 CNOT8Q9UFF9 292 aaKnown RBP15.94■□□□□ 0.14
SCFD1-224ENST00000557713 PHTF1Q9UMS5 762 aa15.94■□□□□ 0.14
SCFD1-224ENST00000557713 UNC13CQ8NB66 2214 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.93■□□□□ 0.14
SCFD1-224ENST00000557713 PSMD11O00231 422 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 WISP1O95388 367 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 ECEL1O95672 775 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 CPP00450 1065 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 CCL4P13236 92 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 ITGB6P18564 788 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 WT1P19544 449 aaPredicted RBP15.93■□□□□ 0.14
SCFD1-224ENST00000557713 LHCGRP22888 699 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 AMPD1P23109 780 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 AK4P27144 223 aaPredicted RBP15.93■□□□□ 0.14
SCFD1-224ENST00000557713 CD82P27701 267 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 IL1R2P27930 398 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 TEAD1P28347 426 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 CD1CP29017 333 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 ALDH4A1P30038 563 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 PCK1P35558 622 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 POLD2P49005 469 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 KCNC4Q03721 635 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 ILF3Q12906 894 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCFD1-224ENST00000557713 TRAF2Q12933 501 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 ZNF235Q14590 738 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 PTPRRQ15256 657 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms