RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 KCTD4Q8WVF5 259 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 MFSD3Q96ES6 412 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 SH3YL1Q96HL8 342 aaPredicted RBP12.59□□□□□ -0.39
APEX1-216ENST00000557159 RDH12Q96NR8 316 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 NAA50Q9GZZ1 169 aaKnown RBP12.59□□□□□ -0.39
APEX1-216ENST00000557159 GBA3Q9H227 469 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 PRDM12Q9H4Q4 367 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 IARS2Q9NSE4 1012 aaKnown RBP12.59□□□□□ -0.39
APEX1-216ENST00000557159 SETD4Q9NVD3 440 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 CCDC167Q9P0B6 97 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 SUN2Q9UH99 717 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 TSC22D4Q9Y3Q8 395 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 CCDC78A2IDD5 438 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 RRN3P2A6NIE6 340 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 H3BRB1 525 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 J3QRK9 145 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 NME4O00746 187 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 RSL1D1O76021 490 aaKnown RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 ZNF865P0CJ78 1059 aaPredicted RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 STAG3L1P0CL83 205 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 HOXD8P13378 290 aaPredicted RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 GFAPP14136 432 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 STMN1P16949 149 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 RPL10P27635 214 aaKnown RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 MRPL19P49406 292 aaKnown RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 RGS7P49802 495 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 AIF1P55008 147 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 GABARAPL2P60520 117 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 CACNB2Q08289 660 aaPredicted RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 TRIM32Q13049 653 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 ITGADQ13349 1161 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 PRAMEF19Q5SWL8 479 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 ZNF362Q5T0B9 420 aaPredicted RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 PPP1R26Q5T8A7 1209 aaPredicted RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 XAF1Q6GPH4 301 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 FBXO46Q6PJ61 603 aaPredicted RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 CNSTQ6PJW8 725 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 FKBP9P1Q75LS8 142 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 UNC93AQ86WB7 457 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 SCUBE3Q8IX30 993 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 PARP8Q8N3A8 854 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 TXNDC5Q8NBS9 432 aaKnown RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 PIK3C3Q8NEB9 887 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 ABHD11Q8NFV4 315 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 RNF139Q8WU17 664 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 TRAPPC12Q8WVT3 735 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 FBXL8Q96CD0 374 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 GLT1D1Q96MS3 346 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 AKIP1Q9NQ31 210 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 PIH1D1Q9NWS0 290 aaKnown RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 OAZ3Q9UMX2 235 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 AKT3Q9Y243 479 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 DCLK1O15075 740 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 MATN4O95460 622 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 CYBAP13498 195 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 GPX3P22352 226 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 STX1BP61266 288 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 OCA2Q04671 838 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 INAQ16352 499 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 FXNQ16595 210 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 PHKG1Q16816 387 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 SLC25A52Q3SY17 297 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 EEF1DP3Q658K8 133 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 THOC7Q6I9Y2 204 aaKnown RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 LINC00523Q86TU6 105 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 SLC22A9Q8IVM8 553 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 DDIASQ8IXT1 998 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 USP33Q8TEY7 942 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 PTCD2Q8WV60 388 aaKnown RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 CYGBQ8WWM9 190 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 SNX19Q92543 992 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 HDAC10Q969S8 669 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 NT5C3BQ969T7 300 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 FBXL20Q96IG2 436 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 C16orf70Q9BSU1 422 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 OSBPL2Q9H1P3 480 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 PLEKHA5Q9HAU0 1116 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.58□□□□□ -0.42e-6■■■□□ 15.5
APEX1-216ENST00000557159 KLHL8Q9P2G9 620 aaPredicted RBP12.58□□□□□ -0.4
APEX1-216ENST00000557159 MFHAS1Q9Y4C4 1052 aa12.58□□□□□ -0.4
APEX1-216ENST00000557159 DNAH12Q6ZR08 3092 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 A0A087WZ62 844 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 C1orf232A0A0U1RR37 186 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 C16orf96A6NNT2 1141 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 TMEM233B4DJY2 109 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 EI24O14681 340 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 PHGDHO43175 533 aaKnown RBP12.57□□□□□ -0.4
APEX1-216ENST00000557159 OXSR1O95747 527 aaPredicted RBP12.57□□□□□ -0.4
APEX1-216ENST00000557159 PGK1P00558 417 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
APEX1-216ENST00000557159 TGM1P22735 817 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 MATKP42679 507 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 HCAR3P49019 387 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 GJA9P57773 515 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 POU4F1Q01851 419 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 CDH17Q12864 832 aa12.57□□□□□ -0.4
APEX1-216ENST00000557159 SKIV2LQ15477 1246 aaKnown RBP12.57□□□□□ -0.4
APEX1-216ENST00000557159 NAPEPLDQ6IQ20 393 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms