RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 EDN2P20800 178 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 NR1H2P55055 460 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 TBX4P57082 545 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 MRPS5P82675 430 aaKnown RBP2.89□□□□□ -1.95
SRP54-207ENST00000555535 GOLGA8FQ08AF8 430 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 RIGQ13278 110 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 MAP9Q49MG5 647 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 STXBP5Q5T5C0 1151 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 TBC1D26Q86UD7 250 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 WDR63Q8IWG1 891 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.89□□□□□ -1.95
SRP54-207ENST00000555535 ZNF34Q8IZ26 560 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 CPXM2Q8N436 756 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 RAB40AQ8WXH6 277 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 RBM4BQ9BQ04 359 aaKnown RBP2.89□□□□□ -1.95
SRP54-207ENST00000555535 KXD1Q9BQD3 176 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 TRIM51Q9BSJ1 452 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 HAUS8Q9BT25 410 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 C17orf75Q9HAS0 396 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 DDX4Q9NQI0 724 aaKnown RBP2.89□□□□□ -1.95
SRP54-207ENST00000555535 CNGB3Q9NQW8 809 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 DERAQ9Y315 318 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 ZHX2Q9Y6X8 837 aa2.89□□□□□ -1.95
SRP54-207ENST00000555535 ARHGAP10A1A4S6 786 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 EGFP01133 1207 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 IFIT2P09913 472 aaKnown RBP2.88□□□□□ -1.95
SRP54-207ENST00000555535 PTPN2P17706 415 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 S1PR1P21453 382 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 GPTP24298 496 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 ADD2P35612 726 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 EIF2S3P41091 472 aaKnown RBP2.88□□□□□ -1.95
SRP54-207ENST00000555535 AARSP49588 968 aaKnown RBP eCLIP2.88□□□□□ -1.95
SRP54-207ENST00000555535 BLKP51451 505 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 RUNX2Q13950 521 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 EDRF1Q3B7T1 1238 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 CCDC38Q502W7 563 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 KCNT1Q5JUK3 1230 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 MTSS1LQ765P7 747 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 C1orf87Q8N0U7 546 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 THAP4Q8WY91 577 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 RILPL2Q969X0 211 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 OTULINQ96BN8 352 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 SDCCAG3Q96C92 435 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 HERPUD2Q9BSE4 406 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 LRRC1Q9BTT6 524 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 ESRP2Q9H6T0 727 aaKnown RBP2.88□□□□□ -1.95
SRP54-207ENST00000555535 PCDH9Q9HC56 1237 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 SAYSD1Q9NPB0 183 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 DNAJC16Q9Y2G8 782 aa2.88□□□□□ -1.95
SRP54-207ENST00000555535 B9A039 149 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 PSMD14O00487 310 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 PER2O15055 1255 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 TK1P04183 234 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 G6PDP11413 515 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 CHATP28329 748 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 TMPOP42166 694 aaKnown RBP2.87□□□□□ -1.95
SRP54-207ENST00000555535 CHRNDQ07001 517 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 BLMHQ13867 455 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 NEDD9Q14511 834 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 CTXN3Q4LDR2 81 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 LRRC8EQ6NSJ5 796 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 ZNF852Q6ZMS4 543 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 KRBA2Q6ZNG9 492 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 NOTCH2NLQ7Z3S9 236 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 KMT5CQ86Y97 462 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 KIAA2013Q8IYS2 634 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 KLHDC9Q8NEP7 349 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 WDR20Q8TBZ3 569 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 CNOT9Q92600 299 aaKnown RBP2.87□□□□□ -1.95
SRP54-207ENST00000555535 RUBCNQ92622 972 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 ZC3HAV1LQ96H79 300 aaKnown RBP2.87□□□□□ -1.95
SRP54-207ENST00000555535 ZNF583Q96ND8 569 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 MXRA8Q9BRK3 442 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 STN1Q9H668 368 aaKnown RBP2.87□□□□□ -1.95
SRP54-207ENST00000555535 FKRPQ9H9S5 495 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 SMYD2Q9NRG4 433 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 MCM9Q9NXL9 1143 aa2.87□□□□□ -1.95
SRP54-207ENST00000555535 HHLA1C9JL84 531 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 DVL1O14640 695 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 MYOD1P15172 320 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 GATA1P15976 413 aaPredicted RBP2.86□□□□□ -1.95
SRP54-207ENST00000555535 CHRNB4P30926 498 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 DDIT3P35638 169 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 HTR3AP46098 478 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 DVL1P1P54792 670 aaPredicted RBP2.86□□□□□ -1.95
SRP54-207ENST00000555535 SEC61BP60468 96 aaKnown RBP2.86□□□□□ -1.95
SRP54-207ENST00000555535 GNB1P62873 340 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 TUBB8Q3ZCM7 444 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 SGO1Q5FBB7 561 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 RSRC2Q7L4I2 434 aaKnown RBP2.86□□□□□ -1.95
SRP54-207ENST00000555535 ERC1Q8IUD2 1116 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 AGBL3Q8NEM8 1001 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 OR2AK2Q8NG84 335 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 AFG1LQ8WV93 481 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 POF1BQ8WVV4 589 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 CDCA5Q96FF9 252 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 ART5Q96L15 291 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 EPHX3Q9H6B9 360 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 MKKSQ9NPJ1 570 aaPredicted RBP2.86□□□□□ -1.95
SRP54-207ENST00000555535 HCFC1R1Q9NWW0 138 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms