RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CENPTQ96BT3 561 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 SNF8Q96H20 258 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 RANBP9Q96S59 729 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 KLF6Q99612 283 aaPredicted RBP12.69□□□□□ -0.38
SYNE2-219ENST00000555323 WRAP53Q9BUR4 548 aaKnown RBP12.69□□□□□ -0.38
SYNE2-219ENST00000555323 FRMD8Q9BZ67 464 aaPredicted RBP12.69□□□□□ -0.38
SYNE2-219ENST00000555323 RAB17Q9H0T7 212 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 UTP11Q9Y3A2 253 aaKnown RBP12.69□□□□□ -0.38
SYNE2-219ENST00000555323 ZNF711Q9Y462 761 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 HS3ST3A1Q9Y663 406 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 R4GN57 208 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 FANCMQ8IYD8 2048 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 A0A0U1RQS6 177 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 PRR23AA6NEV1 266 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 MROH6A6NGR9 719 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 LDB2O43679 373 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 LZTS3O60299 673 aaPredicted RBP12.68□□□□□ -0.38
SYNE2-219ENST00000555323 PPFIA2O75334 1257 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 RECQL5O94762 991 aaPredicted RBP12.68□□□□□ -0.38
SYNE2-219ENST00000555323 TMEM63AO94886 807 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 FSBPO95073 299 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 C1SP09871 688 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 PIRTP0C851 137 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 TPH1P17752 444 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 RPL21P46778 160 aaKnown RBP12.68□□□□□ -0.38
SYNE2-219ENST00000555323 SPINT3P49223 89 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 PDE1BQ01064 536 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 DPTQ07507 201 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 SGCGQ13326 291 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 SETMARQ53H47 684 aaPredicted RBP12.68□□□□□ -0.38
SYNE2-219ENST00000555323 WDR45BQ5MNZ6 344 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
SYNE2-219ENST00000555323 IZUMO3Q5VZ72 239 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 C8orf74Q6P047 294 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 PPP1R21Q6ZMI0 780 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 LYSMD3Q7Z3D4 306 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 CAND1Q86VP6 1230 aaKnown RBP12.68□□□□□ -0.38
SYNE2-219ENST00000555323 DEFB119Q8N690 84 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 DNAAF3Q8N9W5 541 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 SUMF1Q8NBK3 374 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 TMEM145Q8NBT3 493 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 DENND6BQ8NEG7 585 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 BLOC1S5Q8TDH9 187 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 DTD2Q96FN9 168 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 HSPA12BQ96MM6 686 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 GPR63Q9BZJ6 419 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 IL22Q9GZX6 179 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 CDH19Q9H159 772 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 XAB2Q9HCS7 855 aaKnown RBP12.68□□□□□ -0.38
SYNE2-219ENST00000555323 IL17CQ9P0M4 197 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 NFKBIL1Q9UBC1 381 aaPredicted RBP12.68□□□□□ -0.38
SYNE2-219ENST00000555323 RIMKLBQ9ULI2 386 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 SHOC2Q9UQ13 582 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 SNX24Q9Y343 169 aa12.68□□□□□ -0.38
SYNE2-219ENST00000555323 WDFY4Q6ZS81 3184 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 C2orf81A6NN90 581 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 PRAMEF26H0Y7S4 382 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 WNT9AO14904 365 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 CRTAMO95727 393 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 LPOP22079 712 aaPredicted RBP12.67□□□□□ -0.38
SYNE2-219ENST00000555323 HNRNPA2B1P22626 353 aaKnown RBP12.67□□□□□ -0.38
SYNE2-219ENST00000555323 ADRA1DP25100 572 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 MAT2AP31153 395 aaKnown RBP12.67□□□□□ -0.38
SYNE2-219ENST00000555323 DPP6P42658 865 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 ITGA8P53708 1063 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 DCDC1P59894 354 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 TUBB4BP68371 445 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 LAMB3Q13751 1172 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 ACOX1Q15067 660 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 CERCAMQ5T4B2 595 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 ZDHHC20Q5W0Z9 365 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 LYSMD4Q5XG99 296 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 Q6ZVL8 140 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 ZNF765Q7L2R6 523 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 GLT6D1Q7Z4J2 308 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 TP53I13Q8NBR0 393 aaPredicted RBP12.67□□□□□ -0.38
SYNE2-219ENST00000555323 FAM174AQ8TBP5 190 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 ATOH1Q92858 354 aaPredicted RBP12.67□□□□□ -0.38
SYNE2-219ENST00000555323 PEX13Q92968 403 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 SERPINB12Q96P63 405 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 C1QTNF7Q9BXJ2 289 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 RAD18Q9NS91 495 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 GRHL1Q9NZI5 618 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.67□□□□□ -0.38
SYNE2-219ENST00000555323 PKD2L2Q9NZM6 624 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 BFARQ9NZS9 450 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 EIF2B4Q9UI10 523 aaKnown RBP12.67□□□□□ -0.38
SYNE2-219ENST00000555323 DMGDHQ9UI17 866 aaKnown RBP12.67□□□□□ -0.38
SYNE2-219ENST00000555323 PILRBQ9UKJ0 227 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 HCN4Q9Y3Q4 1203 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 CACNA1HO95180 2353 aa12.67□□□□□ -0.38
SYNE2-219ENST00000555323 TRPM6Q9BX84 2022 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 MAGEB16A2A368 324 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 PROB1E7EW31 1015 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 TOR1BO14657 336 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 SLC31A1O15431 190 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 ITPKAP23677 461 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 MAOBP27338 520 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 TEAD1P28347 426 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 HOXD12P35452 270 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms