RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 GNEQ9Y223 722 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 MAP3K4Q9Y6R4 1608 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 OR14I1A6ND48 311 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ANXA2P2A6NMY6 339 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ANXA2P07355 339 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CSH1P0DML2 217 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CSH2P0DML3 217 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 RPL14P50914 215 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TSPAN5P62079 268 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 BNIP2Q12982 314 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ELOAQ14241 798 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 MAPK14Q16539 360 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 HHIPL2Q6UWX4 724 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 C12orf50Q8NA57 414 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TNFAIP8L1Q8WVP5 186 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 EFHD2Q96C19 240 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 POLR1EQ9GZS1 481 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 MED28Q9H204 178 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PNPLA8Q9NP80 782 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 USP20Q9Y2K6 914 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 MAP4K5Q9Y4K4 846 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PCDHGA6Q9Y5G7 932 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 IQCF5A8MTL0 148 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 L7N2F9 121 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 FSBPO95073 299 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CCKBRP32239 447 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ACTR3P61158 418 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 VAMP2P63027 116 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 LRRC69Q6ZNQ3 347 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF366Q8N895 744 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF540Q8NDQ6 660 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TMEM68Q96MH6 324 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 GAD1Q99259 594 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 SLC25A23Q9BV35 468 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 STRA6Q9BX79 667 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PFDN2Q9UHV9 154 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 RPH3AQ9Y2J0 694 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CDC42BPBQ9Y5S2 1711 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PIGNO95427 931 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 LTA4HP09960 611 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 MSX1P28360 303 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 MAT2AP31153 395 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TOR1AIP1Q5JTV8 583 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 GCNT6Q5T4J0 391 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 NEPROQ6NW34 567 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TMPRSS11AQ6ZMR5 421 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF567Q8N184 647 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ELAC1Q9H777 363 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 RIC1Q4ADV7 1423 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CLEC3AO75596 197 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 RNASEH2AO75792 299 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 NOL4O94818 638 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TUFMP49411 452 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF132P52740 706 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 LIPEQ05469 1076 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 MED22Q15528 200 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 RAVER1Q8IY67 606 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 FSTL5Q8N475 847 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 COQ8AQ8NI60 647 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TAPBPLQ9BX59 468 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 SPATC1LQ9H0A9 340 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CCDC86Q9H6F5 360 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ADARB2Q9NS39 739 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 IFT52Q9Y366 437 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CHD4Q14839 1912 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PDE2AO00408 941 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TBX1O43435 398 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 IGKV5-2P06315 115 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 FAAP100Q0VG06 881 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 NAB1Q13506 487 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TLR1Q15399 786 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CERCAMQ5T4B2 595 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PHF19Q5T6S3 580 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PTGR2Q8N8N7 351 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 OR10H4Q8NGA5 316 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 EMID1Q96A84 441 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 KXD1Q9BQD3 176 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 TRHDEQ9UKU6 1024 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ASF1AQ9Y294 204 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 C2orf71A6NGG8 1288 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 AP2A2O94973 939 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PAPSS2O95340 614 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CBX6O95503 412 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ADH1AP07327 375 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 SLC9A4Q6AI14 798 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 IQSEC1Q6DN90 963 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 BEND5Q7L4P6 421 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 OR52K1Q8NGK4 314 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 EXOSC8Q96B26 276 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 C1GALT1C1Q96EU7 318 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 GFM1Q96RP9 751 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 FKBP7Q9Y680 259 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PMF1-BGLAPU3KQ54 211 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 METTL18O95568 372 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 FSHRP23945 695 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 GP5P40197 560 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 NAE1Q13564 534 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SGCBQ16585 318 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PDCD4Q53EL6 469 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PAPD7Q5XG87 772 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms