RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TCF20Q9UGU0 1960 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CKAP5Q14008 2032 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TTC21BQ7Z4L5 1316 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PASKQ96RG2 1323 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 KDM3AQ9Y4C1 1321 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 DCHS1Q96JQ0 3298 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 VPS13AQ96RL7 3174 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 A0A087X0M5 115 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TEX13CA0A0J9YWL9 993 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 A0A1B0GX30 115 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 C17orf102A2RUQ5 167 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PABPN1LA6NDY0 278 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 HMGB1P1B2RPK0 211 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PRR23D1E9PI22 279 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 F5H0A9 414 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 RNMTO43148 476 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TLX3O43711 291 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CELF2O95319 508 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TOMM40O96008 361 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 GALTP07902 379 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PRR23D2P0DMB1 279 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 SNHG28P0DPA3 235 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CAPN3P20807 821 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CCKARP32238 428 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ABCD1P33897 745 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 EPHX2P34913 555 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 DPP6P42658 865 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PIP4K2AP48426 406 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 HARS2P49590 506 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 HTR6P50406 440 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ARSFP54793 590 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 YWHAZP63104 245 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 GAD2Q05329 585 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PKP1Q13835 747 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 KRT32Q14532 448 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ME3Q16798 604 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 SLC9B1Q4ZJI4 515 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 HYIQ5T013 277 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CCDC30Q5VVM6 783 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TBC1D9BQ66K14 1250 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 HAUS3Q68CZ6 603 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 C4orf50Q6ZRC1 276 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 MOB3CQ70IA8 216 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 MEPCEQ7L2J0 689 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TADA2BQ86TJ2 420 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TRIM74Q86UV6 250 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TRIM73Q86UV7 250 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 DIS3L2Q8IYB7 885 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 C11orf65Q8NCR3 313 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 GDPD5Q8WTR4 605 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM170AQ8WVE7 144 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 MSI2Q96DH6 328 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 KLHL15Q96M94 604 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PNRC2Q9NPJ4 139 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 SNTG1Q9NSN8 517 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TMOD3Q9NYL9 352 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TAS2R10Q9NYW0 307 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 MSRB1Q9NZV6 116 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 MPP6Q9NZW5 540 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 KIAA1456Q9P272 454 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TBC1D14Q9P2M4 693 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PLEKHB1Q9UF11 243 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 RAP2CQ9Y3L5 183 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PCDHGB5Q9Y5G0 923 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 SLC4A4Q9Y6R1 1079 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 THSD7BQ9C0I4 1608 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PCDH11XQ9BZA7 1347 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PCDH11YQ9BZA8 1340 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CENPJQ9HC77 1338 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TTC28Q96AY4 2481 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ZSWIM8A7E2V4 1837 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TJP1Q07157 1748 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CFAP47Q6ZTR5 3102 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 IGKV2D-30A0A075B6S6 120 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 A0A096LPK6 155 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 DDTLA6NHG4 134 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 MYMKA6NI61 221 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 A6NNC1 897 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF814B7Z6K7 855 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 GTPBP1O00178 669 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 HSPB6O14558 160 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TNFSF14O43557 240 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 SLC25A17O43808 307 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TACC1O75410 805 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 DDX58O95786 925 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CHRNB1P11230 501 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 UNGP13051 313 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 KRT10P13645 584 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 SLC2A4P14672 509 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CHMP24386 653 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 MT3P25713 68 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 FMO4P31512 558 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TNFSF8P32971 234 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 RFC1P35251 1148 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CASP2P42575 452 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TNNT2P45379 298 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ME1P48163 572 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 THBS3P49746 956 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 EIF5P55010 431 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms