RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ETV5P41161 510 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 SRSF6Q13247 344 aaKnown RBP21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 CNGA3Q16281 694 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 ZNF571Q7Z3V5 609 aaPredicted RBP21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 NRROSQ86YC3 692 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 KIAA1524Q8TCG1 905 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 NUS1Q96E22 293 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 CMKLR1Q99788 373 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 TEX101Q9BY14 249 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 HAUS4Q9H6D7 363 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 ZWILCHQ9H900 591 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 SPATS2LQ9NUQ6 558 aaKnown RBP21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 KCTD5Q9NXV2 234 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 CNOT8Q9UFF9 292 aaKnown RBP21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 PCDHGC4Q9Y5F7 938 aa21.71■■□□□ 1.07
SMARCC2-210ENST00000550519 B4GAT1O43505 415 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 HEXIM1O94992 359 aaKnown RBP21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 CEACAM5P06731 702 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 VIPR1P32241 457 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 HSPA9P38646 679 aaKnown RBP21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 LINC00303Q3SY05 128 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 ZNF438Q7Z4V0 828 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 PGBD5Q8N414 524 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 AOPEPQ8N6M6 819 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 EXD3Q8N9H8 876 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 SGF29Q96ES7 293 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 NUDCD1Q96RS6 583 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 CARS2Q9HA77 564 aaKnown RBP21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 RTN4Q9NQC3 1192 aaKnown RBP21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 PHPT1Q9NRX4 125 aaPredicted RBP21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 WDR70Q9NW82 654 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 AIPL1Q9NZN9 384 aa21.7■■□□□ 1.06
SMARCC2-210ENST00000550519 SCN8AQ9UQD0 1980 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 PRAMEF33A0A0G2JMD5 474 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 DDX3XO00571 662 aaKnown RBP eCLIP21.69■■□□□ 1.067e-15■■□□□ 14
SMARCC2-210ENST00000550519 PRAMEF10O60809 474 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 FGF1P05230 155 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 IL1R2P27930 398 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 PCK1P35558 622 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 PRKCIP41743 596 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 MAZP56270 477 aaKnown RBP21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 ZNF235Q14590 738 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 NR1D2Q14995 579 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 ASIC2Q16515 512 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 DPYSL2Q16555 572 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 E4F1Q66K89 784 aaPredicted RBP21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 XKR5Q6UX68 686 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 USP53Q70EK8 1073 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 HEATR4Q86WZ0 1026 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 USP7Q93009 1102 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 DTD2Q96FN9 168 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 MGME1Q9BQP7 344 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 GSDMCQ9BYG8 508 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 FRMD8Q9BZ67 464 aaPredicted RBP21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 SEMA6CQ9H3T2 930 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 NOD2Q9HC29 1040 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 ETNK2Q9NVF9 386 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 TRNAU1APQ9NX07 287 aaKnown RBP21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 PHTF1Q9UMS5 762 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 SCINQ9Y6U3 715 aa21.69■■□□□ 1.06
SMARCC2-210ENST00000550519 C9orf172C9J069 976 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 H3BRJ5 948 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 AGRPO00253 132 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 MAFKO60675 156 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 CPNE6O95741 557 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 CPP00450 1065 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 KRT10P13645 584 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 LHCGRP22888 699 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 ILF3Q12906 894 aaKnown RBP eCLIP21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 C16orf72Q14CZ0 275 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 PHF19Q5T6S3 580 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 HSD11B1LQ7Z5J1 315 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 POLNQ7Z5Q5 900 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 PIM3Q86V86 326 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 ZFAND4Q86XD8 727 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 DTX1Q86Y01 620 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 ZDHHC1Q8WTX9 485 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 PDCD6IPQ8WUM4 868 aaKnown RBP21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 ZNF653Q96CK0 615 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 B3GNT4Q9C0J1 378 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 RDH14Q9HBH5 336 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 FOXJ2Q9P0K8 574 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 SEPT10Q9P0V9 454 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 TAAR2Q9P1P5 351 aa21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 ARHGEF17Q96PE2 2063 aaPredicted RBP21.68■■□□□ 1.06
SMARCC2-210ENST00000550519 MYO18BQ8IUG5 2567 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 A0A1W2PQC6 194 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 PSMD11O00231 422 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 ITGB2P05107 769 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 AMPD1P23109 780 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 TEAD1P28347 426 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 ARL4AP40617 200 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 ETV3P41162 512 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 MAPK10P53779 464 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 OR1D5P58170 312 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 CDK3Q00526 305 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 TRAF2Q12933 501 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 CLPPQ16740 277 aaPredicted RBP21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 MAP9Q49MG5 647 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 BOLA3Q53S33 107 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms