RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 IFT81Q8WYA0 676 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 PLEKHG4BQ96PX9 1271 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 NEUROG2Q9H2A3 272 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 RRAGDQ9NQL2 400 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 ZSCAN32Q9NX65 697 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 WSB2Q9NYS7 404 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 GRHL1Q9NZI5 618 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 DMGDHQ9UI17 866 aaKnown RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TCAF1Q9Y4C2 921 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 PCDHGA2Q9Y5H1 932 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 KMT2EQ8IZD2 1858 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 SPAG17Q6Q759 2223 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 IGHV1OR15-9A0A0B4J2B8 117 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 NPIPB15A6NHN6 443 aaPredicted RBP9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 E7ESA3 106 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 H7C0S8 307 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 WNT9AO14904 365 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 LZTS3O60299 673 aaPredicted RBP9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 MAGEC1O60732 1142 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 USP12O75317 370 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 GJB3O75712 270 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 USP1O94782 785 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 RHOBTB1O94844 696 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 CTPS1P17812 591 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 PGAM1P18669 254 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 TEAD1P28347 426 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 AKT2P31751 481 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 PHBP35232 272 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 ABL2P42684 1182 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 CHRNA4P43681 627 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 STC1P52823 247 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 SESN2P58004 480 aaPredicted RBP9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 PRAMEP78395 509 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 CSTF1Q05048 431 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 ITGA9Q13797 1035 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 FRG1Q14331 258 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 SPARCL1Q14515 664 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 POU6F1Q14863 301 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 ZNF284Q2VY69 593 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 AARS2Q5JTZ9 985 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 SPANXN3Q5MJ09 141 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 WDR45BQ5MNZ6 344 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 LYPLAL1Q5VWZ2 237 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 ANKRD22Q5VYY1 191 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 LRRC66Q68CR7 880 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 KIAA0895LQ68EN5 471 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 CRTC1Q6UUV9 634 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 LIPIQ6XZB0 460 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 LPCAT2Q7L5N7 544 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 TMC3Q7Z5M5 1100 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 RABEPKQ7Z6M1 372 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 CAND1Q86VP6 1230 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 ZSWIM9Q86XI8 627 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 CACUL1Q86Y37 369 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 RELL1Q8IUW5 271 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 CALML6Q8TD86 181 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 PYROXD1Q8WU10 500 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 GAB3Q8WWW8 586 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 SKA1Q96BD8 255 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 STAMBPL1Q96FJ0 436 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 TOE1Q96GM8 510 aaKnown RBP9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 SGSM3Q96HU1 749 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 LENG8Q96PV6 779 aaPredicted RBP9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 APOL2Q9BQE5 337 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 ZSCAN5AQ9BUG6 496 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 KIFC1Q9BW19 673 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 EPHX3Q9H6B9 360 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 SOX13Q9UN79 622 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 CYP8B1Q9UNU6 501 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 MAD1L1Q9Y6D9 718 aa9.77□□□□□ -0.85
SMARCD1-206ENST00000549274 ZNF106Q9H2Y7 1883 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 CEP192Q8TEP8 1941 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 TCRBV7S3A2A0A539 114 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 MROH6A6NGR9 719 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 GOLGA8MH3BSY2 632 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 RPP40O75818 363 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 ALPIP09923 528 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 C6P13671 934 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 HNRNPA2B1P22626 353 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 PSMA3P25788 255 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 MGAT1P26572 445 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 SPAM1P38567 509 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 SPINT3P49223 89 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 LIG3P49916 1009 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 DPTQ07507 201 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 PDIA2Q13087 525 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 ACOX1Q15067 660 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 ANGPT1Q15389 498 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 CNGA3Q16281 694 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 BBS9Q3SYG4 887 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 TSTD2Q5T7W7 516 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 EMBQ6PCB8 327 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 AFTPHQ6ULP2 937 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 ZNF534Q76KX8 674 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 TRMT10CQ7L0Y3 403 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 LYSMD3Q7Z3D4 306 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 PALM2Q8IXS6 379 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 MPP5Q8N3R9 675 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 MYRIPQ8NFW9 859 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 HEXDCQ8WVB3 486 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms