RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TRIM23P36406 574 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 NDST2P52849 883 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 ACOX1Q15067 660 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 SYCP1Q15431 976 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 ATG14Q6ZNE5 492 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 TMEM159Q96B96 161 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 CCDC74BQ96LY2 380 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 CINPQ9BW66 212 aaPredicted RBP16.49■□□□□ 0.23
SSH1-208ENST00000548522 NAT10Q9H0A0 1025 aaKnown RBP16.49■□□□□ 0.23
SSH1-208ENST00000548522 B4GALT6Q9UBX8 382 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 AP4E1Q9UPM8 1137 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 IGHV5-10-1A0A0J9YXX1 117 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 CFAP69A5D8W1 941 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 DFFAO00273 331 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 EEF2KO00418 725 aaKnown RBP16.48■□□□□ 0.23
SSH1-208ENST00000548522 ATMINO43313 823 aaPredicted RBP16.48■□□□□ 0.23
SSH1-208ENST00000548522 ECEL1O95672 775 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 CPNE6O95741 557 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 FGF1P05230 155 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 TPM3P06753 285 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 HOXC4P09017 264 aaPredicted RBP16.48■□□□□ 0.23
SSH1-208ENST00000548522 CCNB1P14635 433 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 KELP23276 732 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 CSF2RBP32927 897 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 CSNK1DP48730 415 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 BCL2L1Q07817 233 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 PTPRRQ15256 657 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 CNGA3Q16281 694 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 ANO6Q4KMQ2 910 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 NKAIN2Q5VXU1 208 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 PNCKQ6P2M8 343 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 ZNF438Q7Z4V0 828 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 HEATR4Q86WZ0 1026 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 C17orf82Q86X59 251 aaPredicted RBP16.48■□□□□ 0.23
SSH1-208ENST00000548522 ARFGAP1Q8N6T3 406 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 PAF1Q8N7H5 531 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 ZDHHC1Q8WTX9 485 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 COQ10AQ96MF6 247 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 KCTD15Q96SI1 283 aaPredicted RBP16.48■□□□□ 0.23
SSH1-208ENST00000548522 DHX35Q9H5Z1 703 aaKnown RBP16.48■□□□□ 0.23
SSH1-208ENST00000548522 SP110Q9HB58 689 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 TAS2R14Q9NYV8 317 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 TAAR2Q9P1P5 351 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 PCDHB11Q9Y5F2 797 aa16.48■□□□□ 0.23
SSH1-208ENST00000548522 SDK2Q58EX2 2172 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 ARHGAP42A6NI28 874 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 ESPNB1AK53 854 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.47■□□□□ 0.23
SSH1-208ENST00000548522 CEACAM5P06731 702 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 FGF3P11487 239 aaPredicted RBP16.47■□□□□ 0.23
SSH1-208ENST00000548522 MYCLP1P12525 358 aaPredicted RBP16.47■□□□□ 0.23
SSH1-208ENST00000548522 MPSTP25325 297 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 CD1CP29017 333 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 GNPDA1P46926 289 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 POLD2P49005 469 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 ZNF165P49910 485 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 SCNN1BP51168 640 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 AIF1P55008 147 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 SRSF1Q07955 248 aaKnown RBP eCLIP16.47■□□□□ 0.23
SSH1-208ENST00000548522 DENND2CQ68D51 928 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 DCUN1D2Q6PH85 259 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 SLC30A9Q6PML9 568 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 SARM1Q6SZW1 724 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 XKR5Q6UX68 686 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 RFX8Q6ZV50 586 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 CYP4V2Q6ZWL3 525 aaPredicted RBP16.47■□□□□ 0.23
SSH1-208ENST00000548522 PIM3Q86V86 326 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 KIAA1524Q8TCG1 905 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 GPBAR1Q8TDU6 330 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 NUS1Q96E22 293 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 AGPAT1Q99943 283 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 SNRNP25Q9BV90 132 aaKnown RBP16.47■□□□□ 0.23
SSH1-208ENST00000548522 SLC12A9Q9BXP2 914 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 TRIM7Q9C029 511 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 CBX8Q9HC52 389 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 TMEM9Q9P0T7 183 aa16.47■□□□□ 0.23
SSH1-208ENST00000548522 A0A0U1RQS6 177 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 ANKRD62A6NC57 917 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 RHPN2P1A8MT19 583 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 STMND1H3BQB6 276 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 ERCC2P18074 760 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 LHCGRP22888 699 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 ETV3P41162 512 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 TLE1Q04724 770 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 SLC10A7Q0GE19 358 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 NR1D2Q14995 579 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 COLEC12Q5KU26 742 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 FKBP15Q5T1M5 1219 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 HSD11B1LQ7Z5J1 315 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 PTRH1Q86Y79 214 aaKnown RBP16.46■□□□□ 0.23
SSH1-208ENST00000548522 MCOLN2Q8IZK6 566 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 ZSCAN1Q8NBB4 408 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 NKD1Q969G9 470 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 SEMA3CQ99985 751 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 FRMD8Q9BZ67 464 aaPredicted RBP16.46■□□□□ 0.23
SSH1-208ENST00000548522 PCSK1NQ9UHG2 260 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 SUFUQ9UMX1 484 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 PLEKHM1Q9Y4G2 1056 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 PCDHGC4Q9Y5F7 938 aa16.46■□□□□ 0.23
SSH1-208ENST00000548522 NBPF19A0A087WUL8 3843 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms