RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 MAP3K20Q9NYL2 800 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 SLC8A2Q9UPR5 921 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 NEUROG3Q9Y4Z2 214 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 PCDHB2Q9Y5E7 798 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 UBIAD1Q9Y5Z9 338 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 TDRD15B5MCY1 1934 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 WDR81Q562E7 1941 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 KIF26AQ9ULI4 1882 aaPredicted RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 FAM208BQ5VWN6 2430 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 FAM234BA2RU67 622 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 CASTOR2A6NHX0 329 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 POC1B-GALNT4F8VUJ3 575 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 PODXLO00592 558 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 MEIS2O14770 477 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 ADAM12O43184 909 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 TADA2AO75478 443 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 USP1O94782 785 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 WDR47O94967 919 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 CALM1P0DP23 149 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 CALM2P0DP24 149 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 CALM3P0DP25 149 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 CEACAM1P13688 526 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 MX1P20591 662 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 EEF1GP26641 437 aaKnown RBP4.53□□□□□ -1.68
CBX5-203ENST00000547872 MST1P26927 711 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 GABRB3P28472 473 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 SLC5A2P31639 672 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 MCM5P33992 734 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 ATXN3P54252 364 aaPredicted RBP4.53□□□□□ -1.68
CBX5-203ENST00000547872 PRKCEQ02156 737 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 GHRHRQ02643 423 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 BTKQ06187 659 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 GRM4Q14833 912 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 ELF2Q15723 593 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 PSMD5Q16401 504 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 FAM187BQ17R55 369 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 CCDC142Q17RM4 750 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 MCMDC2Q4G0Z9 681 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 C4orf46Q504U0 113 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 FAM78AQ5JUQ0 283 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 ZNF484Q5JVG2 852 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 SYCP2LQ5T4T6 812 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 FAM171A1Q5VUB5 890 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 ABLIM2Q6H8Q1 611 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 TMEM65Q6PI78 240 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 CYB5R4Q7L1T6 521 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 BCDIN3DQ7Z5W3 292 aaKnown RBP4.53□□□□□ -1.68
CBX5-203ENST00000547872 WDR5BQ86VZ2 330 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 CDR2LQ86X02 465 aaPredicted RBP4.53□□□□□ -1.68
CBX5-203ENST00000547872 GALNT4Q8N4A0 578 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 SPEM1Q8N4L4 309 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 DEFB119Q8N690 84 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 NTN5Q8WTR8 489 aaPredicted RBP4.53□□□□□ -1.68
CBX5-203ENST00000547872 PIGKQ92643 395 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 GJA10Q969M2 543 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 KIAA1191Q96A73 305 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 RRP36Q96EU6 259 aaKnown RBP4.53□□□□□ -1.68
CBX5-203ENST00000547872 CPB2Q96IY4 423 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 SGCZQ96LD1 299 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 CAMK1GQ96NX5 476 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 MXRA8Q9BRK3 442 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 GCOM2Q9BZD3 368 aaPredicted RBP4.53□□□□□ -1.68
CBX5-203ENST00000547872 TRIM4Q9C037 500 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 PLEKHA4Q9H4M7 779 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 PSTPIP2Q9H939 334 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 USP29Q9HBJ7 922 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 ZFP14Q9HCL3 533 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 ZNF334Q9HCZ1 680 aaPredicted RBP4.53□□□□□ -1.68
CBX5-203ENST00000547872 ARFGAP3Q9NP61 516 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 GTSE1Q9NYZ3 720 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 RGL1Q9NZL6 768 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 FBXW11Q9UKB1 542 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 PCDHGB2Q9Y5G2 931 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 RAI2Q9Y5P3 530 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 SETXQ7Z333 2677 aaKnown RBP4.53□□□□□ -1.68
CBX5-203ENST00000547872 DOCK6Q96HP0 2047 aa4.53□□□□□ -1.68
CBX5-203ENST00000547872 GCN1Q92616 2671 aaKnown RBP4.52□□□□□ -1.69
CBX5-203ENST00000547872 GPR179Q6PRD1 2367 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 CCDC194A0A1B0GVG4 234 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 ERICH2A1L162 156 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 TISP43B9A030 160 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 I3L4J1 428 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 J3QKU1 62 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 PRRG1O14668 218 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 IFIT3O14879 490 aaKnown RBP4.52□□□□□ -1.69
CBX5-203ENST00000547872 HNRNPDLO14979 420 aaKnown RBP4.52□□□□□ -1.69
CBX5-203ENST00000547872 ZSCAN9O15535 394 aaPredicted RBP4.52□□□□□ -1.69
CBX5-203ENST00000547872 ECI2O75521 394 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 PLEKHA8P1O95397 391 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 MT-CO3P00414 261 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 CHRM5P08912 532 aaPredicted RBP4.52□□□□□ -1.69
CBX5-203ENST00000547872 NHLRC4P0CG21 123 aaPredicted RBP4.52□□□□□ -1.69
CBX5-203ENST00000547872 ZNF37AP17032 561 aaPredicted RBP4.52□□□□□ -1.69
CBX5-203ENST00000547872 EGR1P18146 543 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 ABCB4P21439 1286 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 FCARP24071 287 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 HTR7P34969 479 aa4.52□□□□□ -1.69
CBX5-203ENST00000547872 RDXP35241 583 aaKnown RBP4.52□□□□□ -1.69
CBX5-203ENST00000547872 HSPA7P48741 367 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms