RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 NDST3O95803 873 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 PRLP01236 227 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 HMGA1P17096 107 aaKnown RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 PAX7P23759 505 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 ZNF140P52738 457 aaPredicted RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 ZNF678Q5SXM1 525 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 ALG1LQ6GMV1 187 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 TMEM154Q6P9G4 183 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 LINGO4Q6UY18 593 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 BNC2Q6ZN30 1099 aaPredicted RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 DEFB128Q7Z7B8 93 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 FAM156AQ8NDB6 213 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 MDGA1Q8NFP4 955 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 OR4L1Q8NH43 312 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 BRSK1Q8TDC3 778 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 TMA16Q96EY4 203 aaKnown RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 NSUN5Q96P11 429 aaKnown RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 CINPQ9BW66 212 aaPredicted RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 WDR41Q9HAD4 459 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 FBRSL1Q9HCM7 1045 aaKnown RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 UBA2Q9UBT2 640 aaPredicted RBP13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 GIMAP2Q9UG22 337 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 MED16Q9Y2X0 877 aa13.69□□□□□ -0.22
SLC3A2-220ENST00000542922 UBA6A0AVT1 1052 aaPredicted RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 CBX4O00257 560 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 LINGO3P0C6S8 592 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 ZNF37AP17032 561 aaPredicted RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 OXCT1P55809 520 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 MS4A2Q01362 244 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 DSG1Q02413 1049 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 BFSP2Q13515 415 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 CYTH1Q15438 398 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 ZNF423Q2M1K9 1284 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 SETMARQ53H47 684 aaPredicted RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 PIGGQ5H8A4 983 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 SLC8B1Q6J4K2 584 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 IRGCQ6NXR0 463 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 KBTBD6Q86V97 674 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 OR4K2Q8NGD2 314 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 CEP70Q8NHQ1 597 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 CDKN2AIPNLQ96HQ2 116 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 C3orf30Q96M34 536 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 PSKH2Q96QS6 385 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 MAGEH1Q9H213 219 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 EBF3Q9H4W6 596 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 MEAF6Q9HAF1 191 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 SMPD4Q9NXE4 827 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 GALPQ9UBC7 116 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 MTRRQ9UBK8 725 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 FNDC3AQ9Y2H6 1198 aaKnown RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 PCDHGC4Q9Y5F7 938 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 MICAL3Q7RTP6 2002 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 A0A1B0GTL3 188 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 SNAP91O60641 907 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 UBTFL6P0CB48 400 aaPredicted RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 IMPDH1P20839 514 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 SLC11A2P49281 568 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 STC1P52823 247 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 CDH4P55283 916 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 ELAVL2Q12926 359 aaKnown RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 PLD1Q13393 1074 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 HERC3Q15034 1050 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 ARMC3Q5W041 872 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 C16orf89Q6UX73 402 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 CHSY3Q70JA7 882 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 ADGRG6Q86SQ4 1221 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 PTGR2Q8N8N7 351 aaPredicted RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 LPCAT1Q8NF37 534 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 OR9I1Q8NGQ6 314 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 GPR150Q8NGU9 434 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 GABPB2Q8TAK5 448 aaPredicted RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 STON2Q8WXE9 905 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 JADE3Q92613 823 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 RMDN1Q96DB5 314 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 CCDC126Q96EE4 140 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 TMEM175Q9BSA9 504 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 AARSD1Q9BTE6 412 aaKnown RBP13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 COMMD8Q9NX08 183 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 STK39Q9UEW8 545 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 SEPT3Q9UH03 358 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 FAM50BQ9Y247 325 aa13.68□□□□□ -0.22
SLC3A2-220ENST00000542922 TANC1Q9C0D5 1861 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 SLC22A2O15244 555 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 GPR39O43194 453 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 KDELR3O43731 214 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 EPOP01588 193 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 RHOCP08134 193 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 MTHFD2P13995 350 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 CR2P20023 1033 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 TCN1P20061 433 aaPredicted RBP13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 FMO4P31512 558 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 KPNA1P52294 538 aaPredicted RBP13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 ATN1P54259 1190 aaPredicted RBP13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 FOXA1P55317 472 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 HECTD3Q5T447 861 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms