RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 PTPMT1Q8WUK0 201 aaPredicted RBP5.6□□□□□ -1.51
DDB1-219ENST00000541513 RAB40AQ8WXH6 277 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 ARRDC3Q96B67 414 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 HHIPL1Q96JK4 782 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 PARK7Q99497 189 aaKnown RBP5.6□□□□□ -1.51
DDB1-219ENST00000541513 PRRX2Q99811 253 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 PKP2Q99959 881 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 NDC1Q9BTX1 674 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 NFKBIZQ9BYH8 718 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 STMN4Q9H169 189 aaPredicted RBP5.6□□□□□ -1.51
DDB1-219ENST00000541513 WNT5BQ9H1J7 359 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 EPHX3Q9H6B9 360 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 FANCEQ9HB96 536 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 TLR8Q9NR97 1041 aaKnown RBP5.6□□□□□ -1.51
DDB1-219ENST00000541513 DNAJC17Q9NVM6 304 aaKnown RBP5.6□□□□□ -1.51
DDB1-219ENST00000541513 SEPT10Q9P0V9 454 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 SAE1Q9UBE0 346 aaPredicted RBP5.6□□□□□ -1.51
DDB1-219ENST00000541513 TRPC4Q9UBN4 977 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 HSPB7Q9UBY9 170 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 FBXO40Q9UH90 709 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 SLC23A1Q9UHI7 598 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 MKLN1Q9UL63 735 aa5.6□□□□□ -1.51
DDB1-219ENST00000541513 MED23Q9ULK4 1368 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 AKAP11Q9UKA4 1901 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SMIM30A4D0T7 59 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 CDC14CA4D256 554 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 F8VZ95 297 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 QSOX1O00391 747 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 PER2O15055 1255 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SPOPO43791 374 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 CYTIPO60759 359 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 RECQL4O94761 1208 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 HAUS5O94927 633 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 GBAP04062 536 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 MMP2P08253 660 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 CD19P15391 556 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 GYPEP15421 78 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 MYF6P23409 242 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 GLRA2P23416 452 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 PON1P27169 355 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 HTR7P34969 479 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SOAT1P35610 550 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 FASLGP48023 281 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 NDUFV1P49821 464 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 CAMPP49913 170 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 PTTG1IPP53801 180 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 NME5P56597 212 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 ST8SIA6P61647 398 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 IL13RA1P78552 427 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 MVKQ03426 396 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 RELQ04864 619 aaPredicted RBP5.59□□□□□ -1.51
DDB1-219ENST00000541513 NFIAQ12857 509 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SKIDA1Q1XH10 827 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 AAK1Q2M2I8 961 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 LETM2Q2VYF4 491 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 C6orf136Q5SQH8 315 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SFMBT2Q5VUG0 894 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 AFMIDQ63HM1 303 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 PLA2G4FQ68DD2 849 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 PSRC1Q6PGN9 363 aaPredicted RBP5.59□□□□□ -1.51
DDB1-219ENST00000541513 SERPINA13PQ6UXR4 307 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 DPP8Q6V1X1 898 aaPredicted RBP5.59□□□□□ -1.51
DDB1-219ENST00000541513 NHLRC1Q6VVB1 395 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 PPP1R21Q6ZMI0 780 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 Q6ZS46 218 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 ARHGAP27Q6ZUM4 889 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 CHSY3Q70JA7 882 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SLC51AQ86UW1 340 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 IQCHQ86VS3 1027 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 ARL14Q8N4G2 192 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SLC4A11Q8NBS3 891 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 TBC1D16Q8TBP0 767 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 NAF1Q96HR8 494 aaKnown RBP5.59□□□□□ -1.51
DDB1-219ENST00000541513 SAMD8Q96LT4 415 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 GAD1Q99259 594 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 PUS3Q9BZE2 481 aaKnown RBP5.59□□□□□ -1.51
DDB1-219ENST00000541513 MTMR12Q9C0I1 747 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SLC7A5P2Q9GIP4 190 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.59□□□□□ -1.51
DDB1-219ENST00000541513 IKZF4Q9H2S9 585 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 TFB2MQ9H5Q4 396 aaKnown RBP5.59□□□□□ -1.51
DDB1-219ENST00000541513 COQ10BQ9H8M1 238 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 CARS2Q9HA77 564 aaKnown RBP5.59□□□□□ -1.51
DDB1-219ENST00000541513 SYTL2Q9HCH5 934 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 CENPMQ9NSP4 180 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 ARL8BQ9NVJ2 186 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SPATA6Q9NWH7 488 aaPredicted RBP5.59□□□□□ -1.51
DDB1-219ENST00000541513 ARHGEF38Q9NXL2 777 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 GDAP2Q9NXN4 497 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 NCDNQ9UBB6 729 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 POLLQ9UGP5 575 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 RCOR1Q9UKL0 485 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 SHOC2Q9UQ13 582 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 TDRKHQ9Y2W6 561 aaKnown RBP5.59□□□□□ -1.51
DDB1-219ENST00000541513 PCDHA10Q9Y5I2 948 aa5.59□□□□□ -1.51
DDB1-219ENST00000541513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.59□□□□□ -1.51
DDB1-219ENST00000541513 ZNF609O15014 1411 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 GOLGA6L7A0A1B0GV03 622 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 DENND3A2RUS2 1198 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 F8W735 103 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms