RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 PRKD1Q15139 912 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 LSM12Q3MHD2 195 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 ARMC12Q5T9G4 340 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 LCN1P1Q5VSP4 162 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 NEK5Q6P3R8 708 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 DRAXINQ8NBI3 349 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 WDR18Q9BV38 432 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 TMEM59LQ9UK28 342 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 PCDHGA10Q9Y5H3 936 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 FAM92AA1XBS5 289 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 AIREO43918 545 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 CHRNGP07510 517 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 CD86P42081 329 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 BOP1Q14137 746 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 ECM1Q16610 540 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 RUNDC3AQ59EK9 446 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 ARL13AQ5H913 290 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 SLC26A9Q7LBE3 791 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 PIH1D2Q8WWB5 315 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 USP7Q93009 1102 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 ALG2Q9H553 416 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 PRDM5Q9NQX1 630 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 SCAF8Q9UPN6 1271 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 CCDC189A1A4V9 331 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 AQP12BA6NM10 295 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 KLF11O14901 512 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 RPN2P04844 631 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 PSMA1P25786 263 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 HNF4AP41235 474 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 CTBP1Q13363 440 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 LDLRAP1Q5SW96 308 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 R3HCC1LQ7Z5L2 792 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 AQP12AQ8IXF9 295 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 NKX2-3Q8TAU0 364 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 MRPS31Q92665 395 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 PHF12Q96QT6 1004 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 PANX1Q96RD7 426 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 YME1L1Q96TA2 773 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 NXF3Q9H4D5 531 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 CAB39LQ9H9S4 337 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 NFAT5O94916 1531 aa14.98□□□□□ -0.01
SMARCA4-207ENST00000541122 LGR5O75473 907 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 FAM155BO75949 473 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 CA9Q16790 459 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 NKX1-2Q9UD57 310 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 PGRMC2O15173 223 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 NOS1APO75052 506 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 IGSF6O95976 241 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 ERCC2P18074 760 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 PBLDP30039 288 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 NTSP30990 170 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 RBM48Q5RL73 367 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 TMEM126BQ8IUX1 230 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 ZFP28Q8NHY6 868 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 TP53INP1Q96A56 240 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 TMEM9Q9P0T7 183 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 VPS51Q9UID3 782 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 PTBP2Q9UKA9 531 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 OGDHLQ9ULD0 1010 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 SLC9A8Q9Y2E8 581 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 SHPRHQ149N8 1683 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 ZNF99A8MXY4 864 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 HOXA2O43364 376 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 DYRK3O43781 588 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 HPGDP15428 266 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 ZZZ3Q8IYH5 903 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 GPN1Q9HCN4 374 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 PCDHB7Q9Y5E2 793 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 TLL2Q9Y6L7 1015 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 GCATO75600 419 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 FGF1P05230 155 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 CYP4B1P13584 511 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 PTPN1P18031 435 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 RXRBP28702 533 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 ARL4DP49703 201 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 CLK2P49760 499 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 KRT77Q7Z794 578 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 ZNF467Q7Z7K2 595 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 PEG10Q86TG7 708 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 FBXO16Q8IX29 292 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 JOSD2Q8TAC2 188 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 SLC39A8Q9C0K1 460 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 ZFP14Q9HCL3 533 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 TMEM138Q9NPI0 162 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 MKL2Q9ULH7 1088 aa14.97□□□□□ -0.01
SMARCA4-207ENST00000541122 H3BRB1 525 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 HOXC6P09630 235 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 USP17L7P0C7H9 530 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 CREB1P16220 341 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 HSF2Q03933 536 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 TMEM132BQ14DG7 1078 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 BHLHB9Q6PI77 547 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 ZNF438Q7Z4V0 828 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 YIPF2Q9BWQ6 316 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 ST6GALNAC4Q9H4F1 302 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 TUT1Q9H6E5 874 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 INTS10Q9NVR2 710 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 ELOVL7A1L3X0 281 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 CASKO14936 926 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 SEMA3DO95025 777 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms