RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 GPR21Q99679 349 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 APOL5Q9BWW9 433 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 KLHL4Q9C0H6 718 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 EML4Q9HC35 981 aaKnown RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 CLIC5Q9NZA1 410 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 FKBPLQ9UIM3 349 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 SORCS3Q9UPU3 1222 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 DTNAQ9Y4J8 743 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 A0A087X1B8 175 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 CCDC189A1A4V9 331 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 NPEPPSL1A6NEC2 478 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 CDC7O00311 574 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 SDHDO14521 159 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 BAIAP3O94812 1187 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 S1PR4O95977 384 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 MMP2P08253 660 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 RBP1P09455 135 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 AGTR2P50052 363 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 CLCN5P51795 746 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 FOXA1P55317 472 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 MED21Q13503 144 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 CYTH1Q15438 398 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 TMCO4Q5TGY1 634 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 MSANTD2Q6P1R3 559 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 RNF111Q6ZNA4 994 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 PIWIL4Q7Z3Z4 852 aaKnown RBP8.71□□□□□ -1.01
UBE3B-208ENST00000538070 UMODL1-AS1Q8N2C9 162 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF784Q8NCA9 323 aaPredicted RBP8.71□□□□□ -1.01
UBE3B-208ENST00000538070 ARRDC2Q8TBH0 407 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 ACTRT2Q8TDY3 377 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 BCL7CQ8WUZ0 217 aaPredicted RBP8.71□□□□□ -1.01
UBE3B-208ENST00000538070 SLC39A13Q96H72 371 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 ACOX2Q99424 681 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 SIKE1Q9BRV8 207 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 RTKNQ9BST9 563 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 ZBED2Q9BTP6 218 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 GEMIN8Q9NWZ8 242 aaKnown RBP8.71□□□□□ -1.01
UBE3B-208ENST00000538070 CD274Q9NZQ7 290 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 GALPQ9UBC7 116 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 SRRDQ9UH36 339 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 DNMT3LQ9UJW3 386 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 SNX13Q9Y5W8 968 aa8.71□□□□□ -1.01
UBE3B-208ENST00000538070 C5orf42Q9H799 3197 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 TRPC5OSA6NMA1 111 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 K7ERQ8 282 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 FKBP6O75344 327 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 RTN3O95197 1032 aaPredicted RBP8.71□□□□□ -1.02
UBE3B-208ENST00000538070 MT-ND1P03886 318 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 GALTP07902 379 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 ALPIP09923 528 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 SELPP16109 830 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 EEF1DP29692 281 aaKnown RBP8.71□□□□□ -1.02
UBE3B-208ENST00000538070 MAGEA12P43365 314 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 NDST2P52849 883 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 PSME3P61289 254 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 MRPS35P82673 323 aaKnown RBP8.71□□□□□ -1.02
UBE3B-208ENST00000538070 CREB5Q02930 508 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 DSC1Q08554 894 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 TRIM71Q2Q1W2 868 aaKnown RBP8.71□□□□□ -1.02
UBE3B-208ENST00000538070 VPS26BQ4G0F5 336 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 TECRLQ5HYJ1 363 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 SIDT2Q8NBJ9 832 aaKnown RBP8.71□□□□□ -1.02
UBE3B-208ENST00000538070 C8orf48Q96LL4 319 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 C3orf30Q96M34 536 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 GPR63Q9BZJ6 419 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 TLR9Q9NR96 1032 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 TMEM248Q9NWD8 314 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 TMEM161AQ9NX61 479 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 ZSWIM8A7E2V4 1837 aa8.71□□□□□ -1.02
UBE3B-208ENST00000538070 E7ENX8 843 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 F8W8V4 182 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 LDB2O43679 373 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 ACSL4O60488 711 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 TBL1XO60907 577 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 H2AFYO75367 372 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 PEX11BO96011 259 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 LINGO3P0C6S8 592 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 ATF6P18850 670 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 ME2P23368 584 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 DPP6P42658 865 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 OR4D1Q15615 310 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 MAB21L3Q8N8X9 362 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 CAPNS2Q96L46 248 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 UPF3AQ9H1J1 476 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 STN1Q9H668 368 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 YY1AP1Q9H869 796 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 AGO1Q9UL18 857 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 H3BMM5 538 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 MRASO14807 208 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 SNX2O60749 519 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 RNASEH1O60930 286 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 TRIM16O95361 564 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 STAMBPO95630 424 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 C1RP00736 705 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 MYL4P12829 197 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 ALDH1A3P47895 512 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 SMAD3P84022 425 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 HECTD3Q5T447 861 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 THEMIS2Q5TEJ8 643 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms