RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ROGDIQ9GZN7 287 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 INTS2Q9H0H0 1204 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 MMP28Q9H239 520 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 COG4Q9H9E3 785 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 WDR41Q9HAD4 459 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SPC25Q9HBM1 224 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ENTPD7Q9NQZ7 604 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SENP1Q9P0U3 644 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ITGA11Q9UKX5 1188 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 EIF3LQ9Y262 564 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 PLLPQ9Y342 182 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ASTN1O14525 1302 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 PVALEFA0A1B0GWK0 134 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 USP17L5A8MUK1 530 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 EI24O14681 340 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ACOT8O14734 319 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MRPS14O60783 128 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 ATG13O75143 517 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 VAPBO95292 243 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 GCNT3O95395 438 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 AVPP01185 164 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 PGK2P07205 417 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 C8BP07358 591 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ABHD2P08910 425 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SELLP14151 372 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MSH3P20585 1137 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 AGXTP21549 392 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SDHBP21912 280 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CD68P34810 354 aaPredicted RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 MAP2K4P45985 399 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 LEPRP48357 1165 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 KPNA2P52292 529 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 MAPK12P53778 367 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SLC18A1P54219 525 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 OR2B6P58173 313 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ERVK-8P63133 956 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 LMNB2Q03252 620 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MERTKQ12866 999 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CCINQ13939 588 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TFDP2Q14188 446 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 IRF3Q14653 427 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 HERC3Q15034 1050 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SGCAQ16586 387 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 DUSP7Q16829 419 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 DPY19L1Q2PZI1 675 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 BRMS1LQ5PSV4 323 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 RNASEH2BQ5TBB1 312 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 TRMT10BQ6PF06 316 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 OTOP2Q7RTS6 562 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ADCK1Q86TW2 530 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CHSY1Q86X52 802 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 METTL4Q8N3J2 472 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 PIWIL2Q8TC59 973 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 FNIP1Q8TF40 1166 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 FAR1Q8WVX9 515 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 DYNLL2Q96FJ2 89 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CEP170P1Q96L14 293 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ASB16Q96NS5 453 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MUS81Q96NY9 551 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 KCTD14Q9BQ13 255 aaPredicted RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 RHNO1Q9BSD3 238 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ANO3Q9BYT9 981 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 BCL2L14Q9BZR8 327 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CDCP1Q9H5V8 836 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 RNF167Q9H6Y7 350 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ZC4H2Q9NQZ6 224 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 FAM105AQ9NUU6 356 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ZNF224Q9NZL3 707 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SEPT10Q9P0V9 454 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 KLHL42Q9P2K6 505 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SEPT3Q9UH03 358 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TMPRSS11EQ9UL52 423 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 OAZ3Q9UMX2 235 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 A0A0U1RQS6 177 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 SAGE2PA6NJ88 616 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 KCNU1A8MYU2 1149 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 TOR1AO14656 332 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ACOX3O15254 700 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 RGS5O15539 181 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 HOXA2O43364 376 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 GDF9O60383 454 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 RFPL1O75677 317 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 OR5F1O95221 314 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 SEC24AO95486 1093 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 KRT6AP02538 564 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 KRT6BP04259 564 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 PROS1P07225 676 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 CHRNGP07510 517 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 PLA2G4BP0C869 781 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 CSH1P0DML2 217 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 CSH2P0DML3 217 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 MYCLP12524 364 aaPredicted RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 CYP7A1P22680 504 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ME2P23368 584 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 PKLRP30613 574 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 FMO5P49326 533 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 PRIM2P49643 509 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ERVK-21P61565 698 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 CHRNDQ07001 517 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 POU4F3Q15319 338 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms