RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CBX4O00257 560 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 SLC4A1P02730 911 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 RHOCP08134 193 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 RBP1P09455 135 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 CR2P20023 1033 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 TLE2Q04725 743 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 ZNF177Q13360 481 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-202ENST00000535906 OR52E8Q6IFG1 317 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 SLC39A5Q6ZMH5 540 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 ISCA2Q86U28 154 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 HPS6Q86YV9 775 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 GPR150Q8NGU9 434 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 OR4L1Q8NH43 312 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 CCDC124Q96CT7 223 aaKnown RBP13.39□□□□□ -0.27
VPS33B-202ENST00000535906 SMIM14Q96QK8 99 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 ALG9Q9H6U8 611 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 TNFRSF12AQ9NP84 129 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 CDYLQ9Y232 598 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 YIPF1Q9Y548 306 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 COL4A6Q14031 1691 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 ANAPC1Q9H1A4 1944 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 SCAMP3O14828 347 aaKnown RBP13.39□□□□□ -0.27
VPS33B-202ENST00000535906 SLC22A2O15244 555 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 INSIG1O15503 277 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 PRLP01236 227 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 SOD2P04179 222 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 THRAP10827 490 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 ALDH1A3P47895 512 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 APLP1P51693 650 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 HTRA3P83110 453 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 IKBKEQ14164 716 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 CYTH1Q15438 398 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 TAF12Q16514 161 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 PPM1LQ5SGD2 360 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 SPOUT1Q5T280 376 aaKnown RBP13.39□□□□□ -0.27
VPS33B-202ENST00000535906 FAM45BPQ6NSW5 357 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 MRNIPQ6NTE8 343 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 RNF111Q6ZNA4 994 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 ACAD11Q709F0 780 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 FAM45AQ8TCE6 357 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 RMDN1Q96DB5 314 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 CDKN2AIPNLQ96HQ2 116 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 KLF16Q9BXK1 252 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-202ENST00000535906 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 SMPD4Q9NXE4 827 aa13.39□□□□□ -0.27
VPS33B-202ENST00000535906 A0A1B0GVM2 712 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 RGSL1A5PLK6 1076 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 TCAF2A6NFQ2 919 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 FDXRP22570 491 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 PIK3R1P27986 724 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 LAMB3Q13751 1172 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 TRIM60Q495X7 471 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 TCHHL1Q5QJ38 904 aaPredicted RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 RNF219Q5W0B1 726 aaPredicted RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 NXNQ6DKJ4 435 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 CXorf57Q6NSI4 855 aaKnown RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 SETD3Q86TU7 594 aaPredicted RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 MDGA1Q8NFP4 955 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 PTERQ96BW5 349 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 MARK4Q96L34 752 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 CATSPER2Q96P56 530 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 CYP2S1Q96SQ9 504 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 ZNF385DQ9H6B1 395 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 CATSPERZQ9NTU4 200 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 GTSE1Q9NYZ3 720 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 TBC1D30Q9Y2I9 924 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 PCDHGC4Q9Y5F7 938 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 CD160O95971 181 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 F11P03951 625 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 ADSLP30566 484 aaPredicted RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 ZNF140P52738 457 aaPredicted RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 SULT2A1Q06520 285 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 TPGS2Q68CL5 300 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 FAM117BQ6P1L5 589 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 LINGO4Q6UY18 593 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 CHST9Q7L1S5 443 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 TMEM150AQ86TG1 271 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 EFCAB3Q8N7B9 438 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 RP9Q8TA86 221 aaKnown RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 PPP2R3CQ969Q6 453 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 CCDC126Q96EE4 140 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 ZBED2Q9BTP6 218 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 CCDC28BQ9BUN5 200 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 TDRD1Q9BXT4 1180 aaKnown RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 YIPF3Q9GZM5 350 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 VCX3BQ9H321 246 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 SCUBE2Q9NQ36 999 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 HSFX1Q9UBD0 423 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 PRPF19Q9UMS4 504 aaKnown RBP13.38□□□□□ -0.27
VPS33B-202ENST00000535906 FIS1Q9Y3D6 152 aa13.38□□□□□ -0.27
VPS33B-202ENST00000535906 PARNO95453 639 aaKnown RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 C1RP00736 705 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 PPARGP37231 505 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 SLC26A3P40879 764 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 STC1P52823 247 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 ARF5P84085 180 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 RFTN1Q14699 578 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 FAM219BQ5XKK7 198 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms