RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 AHI1Q8N157 1196 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 ZNF540Q8NDQ6 660 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 TRPM4Q8TD43 1214 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 SHC3Q92529 594 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 MAML3Q96JK9 1138 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 ZNF184Q99676 751 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 ZNF214Q9UL59 606 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 VWDEQ8N2E2 1590 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 UBE2QL1A1L167 161 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 CCL16O15467 120 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 ZMPSTE24O75844 475 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 TFPIP10646 304 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 OMPP47874 163 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 SEMA3GQ9NS98 782 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 EXD2Q9NVH0 621 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 SLC6A2P23975 617 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 ZACNQ401N2 412 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 LIN54Q6MZP7 749 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 NET1Q7Z628 596 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 NARS2Q96I59 477 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 MCMBPQ9BTE3 642 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 PAPSS1O43252 624 aaPredicted RBP18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 RTP1P59025 263 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 CXXC5Q7LFL8 322 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 RP9Q8TA86 221 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 EPB41L1Q9H4G0 881 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 SGK2Q9HBY8 427 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 SNX15Q9NRS6 342 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 VWA7Q9Y334 891 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 SELPP16109 830 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 PSMD8P48556 350 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 TAF10Q12962 218 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 BROXQ5VW32 411 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 SH3RF1Q7Z6J0 888 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 OR10H5Q8NGA6 315 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 SMG7Q92540 1137 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 BTN2A3PQ96KV6 586 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 LRRC19Q9H756 370 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 SAMHD1Q9Y3Z3 626 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 POLR3HQ9Y535 204 aaPredicted RBP18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 ARHGAP23Q9P227 1491 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 HDAC3O15379 428 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 IDO1P14902 403 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 SLC25A52Q3SY17 297 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 TREML2Q5T2D2 321 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 EIF1ADQ8N9N8 165 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 TRIM63Q969Q1 353 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 AIF1LQ9BQI0 150 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 CASZ1Q86V15 1759 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 NFATC1O95644 943 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 FGBP02675 491 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 ARF4P18085 180 aaPredicted RBP18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 ADSSP30520 456 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 SF1Q15637 639 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 GALNT18Q6P9A2 607 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 MFHAS1Q9Y4C4 1052 aa18.18■□□□□ 0.5
SFSWAP-203ENST00000535236 HNRNPLP14866 589 aaKnown RBP eCLIP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 AKT2P31751 481 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 PDCD10Q9BUL8 212 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 TMEM138Q9NPI0 162 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 OGDHLQ9ULD0 1010 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 IFNGP01579 166 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 MMP3P08254 477 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 CDH5P33151 784 aaPredicted RBP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 RPL7AP62424 266 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 RAPSNQ13702 412 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 MCEMP1Q8IX19 187 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 OR7A2PQ8NGA2 310 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 ZNF398Q8TD17 642 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 IPCEF1Q8WWN9 437 aaPredicted RBP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 OMA1Q96E52 524 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 PLK2Q9NYY3 685 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 BTBD3Q9Y2F9 522 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 RIC1Q4ADV7 1423 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 SUV39H1O43463 412 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 VIPP01282 170 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 EIF2B2P49770 351 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 ELP6Q0PNE2 266 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 BST1Q10588 318 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 TSEN2Q8NCE0 465 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 QKIQ96PU8 341 aaKnown RBP eCLIP18.17■□□□□ 0.53e-8■■■■□ 25.6
SFSWAP-203ENST00000535236 TEFMQ96QE5 360 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 PCDHGB3Q9Y5G1 929 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 GLYATL1P3A0A0U1RQE8 302 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 IQCMA0A1B0GVH7 501 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 SHBGP04278 402 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 UGCGQ16739 394 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 DUSP28Q4G0W2 176 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 CDADC1Q9BWV3 514 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 CLUHO75153 1309 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 AP5Z1O43299 807 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 IDH3BO43837 385 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 ATG13O75143 517 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 KHDRBS3O75525 346 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 ELNP15502 786 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 GABRB2P47870 512 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 NDUFA9Q16795 377 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms