RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 CFAP74Q9C0B2 1584 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 BHLHE40O14503 412 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 PRKAA2P54646 552 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 LARS2Q15031 903 aaKnown RBP12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 AP5B1Q2VPB7 878 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 MGAT5BQ3V5L5 792 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 C6orf52Q5T4I8 152 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 GRTP1Q5TC63 336 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 USPL1Q5W0Q7 1092 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 FBXO33Q7Z6M2 555 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 DPPA2Q7Z7J5 298 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 FAM47BQ8NA70 645 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 KCNS2Q9ULS6 477 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 PIN4Q9Y237 131 aaKnown RBP12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 EPCAMP16422 314 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 CTHP32929 405 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 TBC1D25Q3MII6 688 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 TCP10LQ8TDR4 215 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 NELL1Q92832 810 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 HEPHQ9BQS7 1158 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 SLC39A3Q9BRY0 314 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 NOP16Q9Y3C1 178 aaKnown RBP12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 U3KQV3 271 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 ANKRD33BA6NCL7 494 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 FOXN1O15353 648 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 AIREO43918 545 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 CRABP2P29373 138 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 USP4Q13107 963 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 NR1I3Q14994 352 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 SPATA33Q96N06 139 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 TYMPP19971 482 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 USP41Q3LFD5 358 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 SKA3Q8IX90 412 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 OR5T1Q8NG75 326 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 USP43Q70EL4 1123 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 ERI1Q8IV48 349 aaKnown RBP12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 NT5C1AQ9BXI3 368 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 PPP1R14DQ9NXH3 145 aa12.68□□□□□ -0.38
PDE4DIP-227ENST00000529945 RHPN2P1A8MT19 583 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ZNF891A8MT65 544 aaPredicted RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 TLE1Q04724 770 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 STYK1Q6J9G0 422 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SLC26A11Q86WA9 606 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 VAT1Q99536 393 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 MAST1Q9Y2H9 1570 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 DDX3XO00571 662 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SCGB1D1O95968 90 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 CMPK1P30085 196 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ECT2LQ008S8 904 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 UBE2R2Q712K3 238 aaPredicted RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 A2MP01023 1474 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 CCDC85CA6NKD9 419 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 PCDH8O95206 1070 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ERP29P30040 261 aaKnown RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SLC1A2P43004 574 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 CHAF1BQ13112 559 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 TC2NQ8N9U0 490 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 DNAAF2Q9NVR5 837 aaKnown RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 PCDHGB7Q9Y5F8 929 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ZNF16P17020 682 aaPredicted RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 TLX1P31314 330 aaPredicted RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 FMO5P49326 533 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SLC12A3P55017 1021 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 MAD2L1BPQ15013 274 aaPredicted RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 MAPKAPK3Q16644 382 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ZNF75CPQ92670 426 aaPredicted RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 TBC1D10AQ9BXI6 508 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 PUS3Q9BZE2 481 aaKnown RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SLAIN2Q9P270 581 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ZNF230Q9UIE0 474 aaPredicted RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 PCTPQ9UKL6 214 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 KIF1BO60333 1816 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 M0R233 179 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ARPC2O15144 300 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ENDOD1O94919 500 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 PAPSS2O95340 614 aaPredicted RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SPTBP11277 2137 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ITGA4P13612 1032 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 ALDH3B1P43353 468 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 STILQ15468 1287 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 XRRA1Q6P2D8 792 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 TMED4Q7Z7H5 227 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 GPSM1Q86YR5 675 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 OR7G2Q8NG99 324 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 FEZF2Q8TBJ5 459 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SMARCD2Q92925 531 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 TNFRSF25Q93038 417 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 NECAB3Q96P71 396 aaPredicted RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 TDP2O95551 362 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 FCER1AP12319 257 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 EEF1A1P68104 462 aaKnown RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SMARCB1Q12824 385 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 EEF1A1P5Q5VTE0 462 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SWSAP1Q6NVH7 229 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 PAPD4Q6PIY7 484 aaKnown RBP12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 SLITRK1Q96PX8 696 aa12.67□□□□□ -0.38
PDE4DIP-227ENST00000529945 PACSIN3Q9UKS6 424 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms