RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 OSGIN2Q9Y236 505 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 COL6A3P12111 3177 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 TRIOBPQ9H2D6 2365 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 MYH1P12882 1939 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 ZMYM2Q9UBW7 1377 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 LAMA3Q16787 3333 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 IGKV6D-41A0A0C4DH26 115 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 KBTBD13C9JR72 458 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 MPHOSPH10O00566 681 aaKnown RBP5.06□□□□□ -1.6
CSDE1-212ENST00000529046 PRKAB2O43741 272 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 FLOT1O75955 427 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 HLA-DQA2P01906 255 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 CYP4B1P13584 511 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 EEF2P13639 858 aaKnown RBP5.06□□□□□ -1.6
CSDE1-212ENST00000529046 AKR1B1P15121 316 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 STAT1P42224 750 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 MTNR1AP48039 350 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 ID2Q02363 134 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 ZNF91Q05481 1191 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.06□□□□□ -1.6
CSDE1-212ENST00000529046 PKP1Q13835 747 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 KCTD2Q14681 263 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 GJB7Q6PEY0 223 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 LRIG3Q6UXM1 1119 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 ANKRD33Q7Z3H0 272 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 TECPR1Q7Z6L1 1165 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 BRSK2Q8IWQ3 736 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 DEFB123Q8N688 67 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 KBTBD3Q8NAB2 608 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 HDAC7Q8WUI4 952 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 LBHD1Q9BQE6 289 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-212ENST00000529046 CLSTN3Q9BQT9 956 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 WDR83Q9BRX9 315 aaKnown RBP5.06□□□□□ -1.6
CSDE1-212ENST00000529046 SEZ6LQ9BYH1 1024 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 TRIM31Q9BZY9 425 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 BOLA2Q9H3K6 86 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 DCTPP1Q9H773 170 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 WASH6PQ9NQA3 447 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 TLR8Q9NR97 1041 aaKnown RBP5.06□□□□□ -1.6
CSDE1-212ENST00000529046 ECHDC1Q9NTX5 307 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 FBXO40Q9UH90 709 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 GDAQ9Y2T3 454 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 MYO5AQ9Y4I1 1855 aaKnown RBP5.06□□□□□ -1.6
CSDE1-212ENST00000529046 A0A0C4DFX4 3053 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 A0A0G2JMZ2 1700 aa5.06□□□□□ -1.6
CSDE1-212ENST00000529046 RLFQ13129 1914 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 ALPK3Q96L96 1907 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 TTC41PQ6P2S7 1318 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-212ENST00000529046 TMEM247A6NEH6 219 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 RRN3P2A6NIE6 340 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 FOXO6A8MYZ6 492 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 F5H6K3 240 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 F8W810 466 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 PRPF4O43172 522 aaKnown RBP eCLIP5.05□□□□□ -1.65e-7■■■■□ 22.3
CSDE1-212ENST00000529046 ATG13O75143 517 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 MBD4O95243 580 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 FGF2P09038 288 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 KLRC3Q07444 240 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 TBL3Q12788 808 aaKnown RBP5.05□□□□□ -1.6
CSDE1-212ENST00000529046 SLC12A1Q13621 1099 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 RBMS2Q15434 407 aaKnown RBP5.05□□□□□ -1.6
CSDE1-212ENST00000529046 TAF12Q16514 161 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 ZNF260Q3ZCT1 412 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 PIK3CD-AS1Q5SR53 167 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 WDR78Q5VTH9 848 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 ATG16L1Q676U5 607 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 AWAT2Q6E213 333 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 SYNE3Q6ZMZ3 975 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 DDIASQ8IXT1 998 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 NRACQ8N912 160 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 SLC44A5Q8NCS7 719 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 GMCL1P1Q8NEA9 526 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 SH3KBP1Q96B97 665 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 RNFT2Q96EX2 444 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 DYNLL2Q96FJ2 89 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 MAELQ96JY0 434 aaKnown RBP5.05□□□□□ -1.6
CSDE1-212ENST00000529046 ZFYVE19Q96K21 471 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 TUBB6Q9BUF5 446 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 TEX13BQ9BXU2 312 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 MAF1Q9H063 256 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 STN1Q9H668 368 aaKnown RBP5.05□□□□□ -1.6
CSDE1-212ENST00000529046 TMEM45AQ9NWC5 275 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 ARL15Q9NXU5 204 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 UPB1Q9UBR1 384 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 SLC13A4Q9UKG4 626 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 TNFSF13BQ9Y275 285 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-212ENST00000529046 CLDN16Q9Y5I7 305 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 SLC4A4Q9Y6R1 1079 aa5.05□□□□□ -1.6
CSDE1-212ENST00000529046 PLIN4Q96Q06 1357 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 ELP1O95163 1332 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 TRBV5-7A0A0A0MS05 114 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-212ENST00000529046 ZNF814B7Z6K7 855 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 RNF113AO15541 343 aaKnown RBP5.04□□□□□ -1.6
CSDE1-212ENST00000529046 CCNT1O60563 726 aaKnown RBP5.04□□□□□ -1.6
CSDE1-212ENST00000529046 DUSP11O75319 330 aaKnown RBP5.04□□□□□ -1.6
CSDE1-212ENST00000529046 TMEM191BP0C7N4 346 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 MAPK9P45984 424 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms