RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 AOPEPQ8N6M6 819 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 OR6C4Q8NGE1 309 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 ATL2Q8NHH9 583 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 FNIP1Q8TF40 1166 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 MCEEQ96PE7 176 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 TAAR9Q96RI9 348 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 CINPQ9BW66 212 aaPredicted RBP6.59□□□□□ -1.35
CD44-221ENST00000526000 SLC12A9Q9BXP2 914 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 ZMYND15Q9H091 742 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 GANQ9H2C0 597 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 DHX35Q9H5Z1 703 aaKnown RBP6.59□□□□□ -1.35
CD44-221ENST00000526000 CATSPERBQ9H7T0 1116 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 SP110Q9HB58 689 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 CBX8Q9HC52 389 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 GEMIN8Q9NWZ8 242 aaKnown RBP6.59□□□□□ -1.35
CD44-221ENST00000526000 SLC39A1Q9NY26 324 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 AKAP7Q9P0M2 348 aaPredicted RBP6.59□□□□□ -1.35
CD44-221ENST00000526000 TAAR2Q9P1P5 351 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 B4GALT6Q9UBX8 382 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 KLHL3Q9UH77 587 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 CD84Q9UIB8 345 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 APPL1Q9UKG1 709 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 PRKAB1Q9Y478 270 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 PCDHGC4Q9Y5F7 938 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 DGKBQ9Y6T7 804 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 A0A1W2PQC6 194 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ARHGAP42A6NI28 874 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 EEF2KO00418 725 aaKnown RBP6.58□□□□□ -1.36
CD44-221ENST00000526000 RAD1O60671 282 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 PRAMEF11O60813 436 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 CPNE6O95741 557 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ITGB2P05107 769 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 CEACAM5P06731 702 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 SFTPCP11686 197 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 UNGP13051 313 aaPredicted RBP6.58□□□□□ -1.36
CD44-221ENST00000526000 CCNB1P14635 433 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 NR1D1P20393 614 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 TNFAIP3P21580 790 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 KELP23276 732 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 SERPINA4P29622 427 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 CSTF2P33240 577 aaKnown RBP eCLIP6.58□□□□□ -1.36
CD44-221ENST00000526000 UGT1A3P35503 534 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 MMP12P39900 470 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ETV3P41162 512 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 STAT1P42224 750 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 MAPK9P45984 424 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ATP1A2P50993 1020 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 KIAA1024LP59773 190 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 CTBSQ01459 385 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 OGDHQ02218 1023 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 UBAP2LQ14157 1087 aaKnown RBP6.58□□□□□ -1.36
CD44-221ENST00000526000 CLEC16AQ2KHT3 1053 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 DEFB109BQ30KR1 87 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 PARP15Q460N3 678 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 FILIP1LQ4L180 1135 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 FAM182AQ5T1J6 154 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ATP1A1-AS1Q5TC04 95 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ANKS6Q68DC2 871 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 DNAJC24Q6P3W2 148 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 BRAT1Q6PJG6 821 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 Q6ZVL8 140 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ARCQ7LC44 396 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 HSD11B1LQ7Z5J1 315 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 LURAP1LQ8IV03 231 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 CACNA2D3Q8IZS8 1091 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 UMODL1-AS1Q8N2C9 162 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 CASKIN2Q8WXE0 1202 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 NTAN1Q96AB6 310 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 IQCDQ96DY2 449 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ZNF641Q96N77 438 aaPredicted RBP6.58□□□□□ -1.36
CD44-221ENST00000526000 KCTD15Q96SI1 283 aaPredicted RBP6.58□□□□□ -1.36
CD44-221ENST00000526000 EPN3Q9H201 632 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 WDR26Q9H7D7 661 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ATP13A3Q9H7F0 1226 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 PDFQ9HBH1 243 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 TMEM51Q9NW97 253 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 TAS2R14Q9NYV8 317 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ANKMY1Q9P2S6 941 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 SEPT3Q9UH03 358 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 LIMA1Q9UHB6 759 aaKnown RBP6.58□□□□□ -1.36
CD44-221ENST00000526000 SUFUQ9UMX1 484 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ST14Q9Y5Y6 855 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 DOPEY2Q9Y3R5 2298 aa6.58□□□□□ -1.36
CD44-221ENST00000526000 ZFC3H1O60293 1989 aaKnown RBP6.58□□□□□ -1.36
CD44-221ENST00000526000 NYNRINQ9P2P1 1898 aaKnown RBP6.58□□□□□ -1.36
CD44-221ENST00000526000 TENM4Q6N022 2769 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 LOC101059948A0A1B0GTJ6 334 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 TSPAN11A1L157 253 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ANKRD62A6NC57 917 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 WASH4PA8MWX3 477 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 STMND1H3BQB6 276 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 TNFRSF10CO14798 259 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 INPP4BO15327 924 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ATMINO43313 823 aaPredicted RBP6.57□□□□□ -1.36
CD44-221ENST00000526000 CBFA2T2O43439 604 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 NUDT21O43809 227 aaKnown RBP6.57□□□□□ -1.36
CD44-221ENST00000526000 SNX2O60749 519 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 ASMTLO95671 621 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 CALB1P05937 261 aa6.57□□□□□ -1.36
CD44-221ENST00000526000 PNLIPP16233 465 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms