RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 FAM118AQ9NWS6 357 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 TMEM160Q9NX00 188 aa3.89□□□□□ -1.79
CSDE1-210ENST00000525878 F5H423 210 aaPredicted RBP3.88□□□□□ -1.79
CSDE1-210ENST00000525878 INHBAP08476 426 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 CNPP09543 421 aaKnown RBP3.88□□□□□ -1.79
CSDE1-210ENST00000525878 MYOD1P15172 320 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 NR1D1P20393 614 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 EDN2P20800 178 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 DCTP40126 519 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 HNRNPH2P55795 449 aaKnown RBP3.88□□□□□ -1.79
CSDE1-210ENST00000525878 TUBB8Q3ZCM7 444 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 LRRC8EQ6NSJ5 796 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 RGMBQ6NW40 437 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 C1orf228Q6PIY5 440 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 ASB18Q6ZVZ8 466 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 KCTD8Q6ZWB6 473 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 NOTCH2NLQ7Z3S9 236 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 MOGAT3Q86VF5 341 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 ADAD2Q8NCV1 583 aaKnown RBP3.88□□□□□ -1.79
CSDE1-210ENST00000525878 TRAPPC12Q8WVT3 735 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 FBXL8Q96CD0 374 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 LTV1Q96GA3 475 aaPredicted RBP3.88□□□□□ -1.79
CSDE1-210ENST00000525878 FEM1BQ9UK73 627 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 RCOR1Q9UKL0 485 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 DLGAP4Q9Y2H0 992 aa3.88□□□□□ -1.79
CSDE1-210ENST00000525878 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.88□□□□□ -1.79
CSDE1-210ENST00000525878 RRP7AQ9Y3A4 280 aaKnown RBP3.88□□□□□ -1.79
CSDE1-210ENST00000525878 CTAGE9A4FU28 777 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 VWA3AA6NCI4 1184 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 CYC1P08574 325 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 CTAGE8P0CG41 777 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 G6PDP11413 515 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 DDX5P17844 614 aaKnown RBP3.87□□□□□ -1.79
CSDE1-210ENST00000525878 MAOAP21397 527 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 DDIT3P35638 169 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 NOVP48745 357 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 HOXA1P49639 335 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-210ENST00000525878 TBL3Q12788 808 aaKnown RBP3.87□□□□□ -1.79
CSDE1-210ENST00000525878 GRIK3Q13003 919 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 POSTNQ15063 836 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 PDSS1Q5T2R2 415 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 SERTAD4-AS1Q5TG53 156 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 CEACAM20Q6UY09 585 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 SLC36A4Q6YBV0 504 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 LINGO2Q7L985 606 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 HERC6Q8IVU3 1022 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 CTAGE4Q8IX94 777 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 DSELQ8IZU8 1212 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 USP38Q8NB14 1042 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 BEST2Q8NFU1 509 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 TRIM58Q8NG06 486 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 OR2AK2Q8NG84 335 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 ZNF570Q96NI8 536 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 CD180Q99467 661 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 SYT17Q9BSW7 474 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 MROH8Q9H579 483 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 MMP25Q9NPA2 562 aa3.87□□□□□ -1.79
CSDE1-210ENST00000525878 CACNA1FO60840 1977 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 BLOC1S5-TXNDC5H3BN57 136 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 PEX12O00623 359 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 PCDH7O60245 1069 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 RXRAP19793 462 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 RRM1P23921 792 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 CORO1AP31146 461 aaKnown RBP3.86□□□□□ -1.79
CSDE1-210ENST00000525878 MMP14P50281 582 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 GAGE5Q13069 117 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 GAGE6Q13070 117 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 SLC1A5Q15758 541 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 LPAL2Q16609 132 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 EIF2S3LQ2VIR3 472 aaKnown RBP3.86□□□□□ -1.79
CSDE1-210ENST00000525878 SYCP2LQ5T4T6 812 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 LSM14AQ8ND56 463 aaKnown RBP3.86□□□□□ -1.79
CSDE1-210ENST00000525878 CEP70Q8NHQ1 597 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 ZNF599Q96NL3 588 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 TAOK3Q9H2K8 898 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 NOD2Q9HC29 1040 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-210ENST00000525878 OR2W1Q9Y3N9 320 aa3.86□□□□□ -1.79
CSDE1-210ENST00000525878 DVL1O14640 695 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 WDR1O75083 606 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 HEXAP06865 529 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 GNL1P36915 607 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-210ENST00000525878 DVL1P1P54792 670 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-210ENST00000525878 GNB1P62873 340 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 NAA25Q14CX7 972 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 ZNF667Q5HYK9 610 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 SLC27A1Q6PCB7 646 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 SLC35F3Q8IY50 421 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 FTSJ3Q8IY81 847 aaKnown RBP3.85□□□□□ -1.79
CSDE1-210ENST00000525878 TMEM190Q8WZ59 177 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 SCRN2Q96FV2 425 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 SLC39A13Q96H72 371 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 SIN3AQ96ST3 1273 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 ASCL2Q99929 193 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 SH3GL2Q99962 352 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 PYGO2Q9BRQ0 406 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 MAGEE1Q9HCI5 957 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 SNTG1Q9NSN8 517 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 BABAM1Q9NWV8 329 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms