RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 HNF1BP35680 557 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CLDN2P57739 230 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 YPEL5P62699 121 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 IL9RQ01113 521 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 SEMG2Q02383 582 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 ACOX1Q15067 660 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CNGA3Q16281 694 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PCSK7Q16549 785 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CCNG2Q16589 344 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 SPATS2Q86XZ4 545 aaKnown RBP16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 RASGEF1CQ8N431 466 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 TRIB3Q96RU7 358 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 NAP1L3Q99457 506 aaPredicted RBP16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 KCND1Q9NSA2 647 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PCDHGB2Q9Y5G2 931 aa16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSGALNACT1-216ENST00000524213 USP27XA6NNY8 438 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CES2O00748 559 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 GCATO75600 419 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 HLA-DPA1P20036 260 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CXCR5P32302 372 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 IGFALSP35858 605 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CCT8P50990 548 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 WNT3AP56704 352 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PFN3P60673 137 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 MTM1Q13496 603 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PTK2BQ14289 1009 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 SUZ12Q15022 739 aaKnown RBP16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 IRF4Q15306 451 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PARP6Q2NL67 630 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 WSCD2Q2TBF2 565 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 P3H1Q32P28 736 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 DRICH1Q6PGQ1 229 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CRTC1Q6UUV9 634 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 KDELC1Q6UW63 502 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 DBX2Q6ZNG2 339 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 Q6ZSR6 202 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 ARHGEF18Q6ZSZ5 1173 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PTAR1Q7Z6K3 402 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CBARPQ8N350 705 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 FAM71DQ8N9W8 422 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 OR13H1Q8NG92 308 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CCDC110Q8TBZ0 833 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CCHCR1Q8TD31 782 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 SETD7Q8WTS6 366 aaKnown RBP16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 ATG4AQ8WYN0 398 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 RTP4Q96DX8 246 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 COQ10AQ96MF6 247 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 ELF4Q99607 663 aaPredicted RBP16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 TMEM121Q9BTD3 319 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 FSD1LQ9BXM9 530 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 MAGEE1Q9HCI5 957 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 UBP1Q9NZI7 540 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 ZNF148Q9UQR1 794 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 DRG1Q9Y295 367 aaKnown RBP16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 BTBD3Q9Y2F9 522 aa16.61■□□□□ 0.25
CSGALNACT1-216ENST00000524213 A0A1B0GTQ1 180 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 LOC285095A0A1B0GVY8 99 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 POM121BA6NF01 834 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PSMD3O43242 534 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 CBFA2T3O75081 653 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 ATP1A1P05023 1023 aaKnown RBP16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 TCP1P17987 556 aaKnown RBP16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 LHCGRP22888 699 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PMLP29590 882 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 ARRB1P49407 418 aaPredicted RBP16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 SIM1P81133 766 aaPredicted RBP16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 GALNT3Q14435 633 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 SHBQ15464 509 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 SIX1Q15475 284 aaPredicted RBP16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 OASLQ15646 514 aaKnown RBP16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 LRRC66Q68CR7 880 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 DENND2CQ68D51 928 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 KDELC2Q7Z4H8 507 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 TSPAN33Q86UF1 283 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 C1orf54Q8WWF1 131 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 NUS1Q96E22 293 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 DTD2Q96FN9 168 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 OXNAD1Q96HP4 312 aaPredicted RBP16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 MRGPRX2Q96LB1 330 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 OSBPL9Q96SU4 736 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 MBNL1Q9NR56 388 aaKnown RBP16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 GPR27Q9NS67 375 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PCOLCE2Q9UKZ9 415 aa16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 TTC7AQ9ULT0 858 aaPredicted RBP16.6■□□□□ 0.25
CSGALNACT1-216ENST00000524213 C1orf232A0A0U1RR37 186 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 FLRT2O43155 660 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PCDHGA12O60330 932 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PYGLP06737 847 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 ITGAVP06756 1048 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 PSMB4P28070 264 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 RXRGP48443 463 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 STC1P52823 247 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 THOP1P52888 689 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 GNG11P61952 73 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 TRIP6Q15654 476 aaKnown RBP16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 FAM182AQ5T1J6 154 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 ESRP1Q6NXG1 681 aaKnown RBP16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 HSD11B1LQ7Z5J1 315 aa16.59■□□□□ 0.25
CSGALNACT1-216ENST00000524213 NLRP8Q86W28 1048 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms