RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SARDHQ9UL12 918 aa6.12□□□□□ -1.43
CPNE3-206ENST00000523469 TUBGCP6Q96RT7 1819 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 COL24A1Q17RW2 1714 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 KNDC1Q76NI1 1749 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 NRXN1Q9ULB1 1477 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 HSPB2A8KAH6 182 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 CBSLP0DN79 551 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 IRF1P10914 325 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 CBSP35520 551 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 HTR6P50406 440 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 DSC1Q08554 894 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 MYBPC2Q14324 1141 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 HSPB2Q16082 182 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 HIST2H2ACQ16777 129 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-206ENST00000523469 INO80CQ6PI98 192 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-206ENST00000523469 GLCCI1Q86VQ1 547 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 SAMD14Q8IZD0 417 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-206ENST00000523469 FBXL14Q8N1E6 418 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 PAF1Q8N7H5 531 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 SNAPC3Q92966 411 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 KLHL29Q96CT2 875 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 ZC3HAV1LQ96H79 300 aaKnown RBP6.11□□□□□ -1.43
CPNE3-206ENST00000523469 KLHL15Q96M94 604 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 UNC45AQ9H3U1 944 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 CLK4Q9HAZ1 481 aaKnown RBP6.11□□□□□ -1.43
CPNE3-206ENST00000523469 TMEM51Q9NW97 253 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 A3GALT2U3KPV4 340 aa6.11□□□□□ -1.43
CPNE3-206ENST00000523469 SSH2Q76I76 1423 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 ANKRD50Q9ULJ7 1429 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 A0A0U1RQF3 1178 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 A0A1W2PQM1 296 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 TOMM70O94826 608 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 ATP1A3P13637 1013 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 EDN2P20800 178 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 ELF1P32519 619 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 ABCD1P33897 745 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 KRT9P35527 623 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 CDKN2AP42771 156 aaKnown RBP6.1□□□□□ -1.43
CPNE3-206ENST00000523469 AMTP48728 403 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 EFNA5P52803 228 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 HDAC4P56524 1084 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 FOXD4Q12950 439 aaPredicted RBP6.1□□□□□ -1.43
CPNE3-206ENST00000523469 CTTNQ14247 550 aaKnown RBP6.1□□□□□ -1.43
CPNE3-206ENST00000523469 ARHGEF6Q15052 776 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 SOWAHAQ2M3V2 549 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 ESCO2Q56NI9 601 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 TXNDC8Q6A555 127 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 PDXDC1Q6P996 788 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 CPLX2Q6PUV4 134 aaKnown RBP6.1□□□□□ -1.43
CPNE3-206ENST00000523469 ZDHHC17Q8IUH5 632 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 C9orf106Q8NAJ2 232 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 PCYOX1LQ8NBM8 494 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 MIB2Q96AX9 1013 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 LYZL4Q96KX0 146 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 TMEM204Q9BSN7 226 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 SLC26A6Q9BXS9 759 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 NUF2Q9BZD4 464 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 SLC25A18Q9H1K4 315 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 SMYD2Q9NRG4 433 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 CTNNAL1Q9UBT7 734 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 PAPPAQ13219 1627 aa6.1□□□□□ -1.43
CPNE3-206ENST00000523469 ATP7BP35670 1465 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 KIAA0232Q92628 1395 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 PPLO60437 1756 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 IGHV4-28A0A0C4DH34 117 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 A0A1B0GVM2 712 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 J3KRW8 73 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 TAF4O00268 1085 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 KCNAB3O43448 404 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 TNFSF14O43557 240 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 MTA2O94776 668 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 PAX3P23760 479 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 GABRB2P47870 512 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 THBS3P49746 956 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 CASP6P55212 293 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 CRYZQ08257 329 aaKnown RBP6.09□□□□□ -1.43
CPNE3-206ENST00000523469 RNPS1Q15287 305 aaKnown RBP6.09□□□□□ -1.43
CPNE3-206ENST00000523469 SHBQ15464 509 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 TDRD12Q587J7 1177 aaKnown RBP6.09□□□□□ -1.43
CPNE3-206ENST00000523469 C8orf82Q6P1X6 216 aaPredicted RBP6.09□□□□□ -1.43
CPNE3-206ENST00000523469 PARP16Q8N5Y8 322 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 SAAL1Q96ER3 474 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 NR1H4Q96RI1 486 aaPredicted RBP6.09□□□□□ -1.43
CPNE3-206ENST00000523469 SIN3AQ96ST3 1273 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 MXRA8Q9BRK3 442 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 H2AFJQ9BTM1 129 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 CYSLTR2Q9NS75 346 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 ZNF69Q9UC07 566 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 A4GNTQ9UNA3 340 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 CAMK2AQ9UQM7 478 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 NAALADL1Q9UQQ1 740 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 SLC45A1Q9Y2W3 748 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 FAM96BQ9Y3D0 163 aa6.09□□□□□ -1.43
CPNE3-206ENST00000523469 CKAP5Q14008 2032 aa6.08□□□□□ -1.44
CPNE3-206ENST00000523469 PIK3C2AO00443 1686 aa6.08□□□□□ -1.44
CPNE3-206ENST00000523469 TTC36A6NLP5 189 aa6.08□□□□□ -1.44
CPNE3-206ENST00000523469 SMAD6O43541 496 aaKnown RBP6.08□□□□□ -1.44
CPNE3-206ENST00000523469 RGS11O94810 467 aa6.08□□□□□ -1.44
CPNE3-206ENST00000523469 MT-CYBP00156 380 aaPredicted RBP6.08□□□□□ -1.44
CPNE3-206ENST00000523469 GLUD1P00367 558 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms