RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 PRAMEF14Q5SWL7 426 aa25.99■■□□□ 1.75
DDR1-279ENST00000515529 SPATS2Q86XZ4 545 aaKnown RBP25.99■■□□□ 1.75
DDR1-279ENST00000515529 OXNAD1Q96HP4 312 aaPredicted RBP25.99■■□□□ 1.75
DDR1-279ENST00000515529 SMIM14Q96QK8 99 aa25.99■■□□□ 1.75
DDR1-279ENST00000515529 SRPK1Q96SB4 655 aaKnown RBP25.99■■□□□ 1.75
DDR1-279ENST00000515529 GOLGA6AQ9NYA3 693 aa25.99■■□□□ 1.75
DDR1-279ENST00000515529 ZKSCAN5Q9Y2L8 839 aa25.99■■□□□ 1.75
DDR1-279ENST00000515529 PSMB4P28070 264 aa25.98■■□□□ 1.75
DDR1-279ENST00000515529 STIP1P31948 543 aaKnown RBP25.98■■□□□ 1.75
DDR1-279ENST00000515529 ETV3P41162 512 aa25.98■■□□□ 1.75
DDR1-279ENST00000515529 PFN3P60673 137 aa25.98■■□□□ 1.75
DDR1-279ENST00000515529 YPEL5P62699 121 aa25.98■■□□□ 1.75
DDR1-279ENST00000515529 MTM1Q13496 603 aa25.98■■□□□ 1.75
DDR1-279ENST00000515529 KDELC1Q6UW63 502 aa25.98■■□□□ 1.75
DDR1-279ENST00000515529 HSD11B1LQ7Z5J1 315 aa25.98■■□□□ 1.75
DDR1-279ENST00000515529 LYSMD1Q96S90 227 aa25.98■■□□□ 1.75
DDR1-279ENST00000515529 DLL3Q9NYJ7 618 aa25.98■■□□□ 1.75
DDR1-279ENST00000515529 A0A1B0GTQ1 180 aa25.97■■□□□ 1.75
DDR1-279ENST00000515529 EPOP01588 193 aa25.97■■□□□ 1.75
DDR1-279ENST00000515529 ATP1A1P05023 1023 aaKnown RBP25.97■■□□□ 1.75
DDR1-279ENST00000515529 GNG11P61952 73 aa25.97■■□□□ 1.75
DDR1-279ENST00000515529 IL9RQ01113 521 aa25.97■■□□□ 1.75
DDR1-279ENST00000515529 INPP5AQ14642 412 aa25.97■■□□□ 1.75
DDR1-279ENST00000515529 SLC25A41Q8N5S1 370 aa25.97■■□□□ 1.75
DDR1-279ENST00000515529 DTD2Q96FN9 168 aa25.97■■□□□ 1.75
DDR1-279ENST00000515529 NAP1L3Q99457 506 aaPredicted RBP25.97■■□□□ 1.75
DDR1-279ENST00000515529 HOMER3Q9NSC5 361 aa25.97■■□□□ 1.75
DDR1-279ENST00000515529 PCDHGB2Q9Y5G2 931 aa25.97■■□□□ 1.75
DDR1-279ENST00000515529 CEP250Q9BV73 2442 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 GCATO75600 419 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 CLDN7O95471 211 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 IFNB1P01574 187 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 HLA-DPA1P20036 260 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 HTR1BP28222 390 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 CCNG2Q16589 344 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 P3H1Q32P28 736 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 Q6ZVL8 140 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 SLC22A18ASQ8N1D0 253 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 CCDC89Q8N998 374 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 MRGPRX2Q96LB1 330 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 SLC32A1Q9H598 525 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 DNAJC28Q9NX36 388 aa25.96■■□□□ 1.75
DDR1-279ENST00000515529 A0A0U1RQS6 177 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 SPTY2D1-AS1A0A0U1RR47 76 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 LOC285095A0A1B0GVY8 99 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 SLC4A1P02730 911 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 GM2AP17900 193 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 STC1P52823 247 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 GDF10P55107 478 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 PTSQ03393 145 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 OASLQ15646 514 aaKnown RBP25.95■■□□□ 1.74
DDR1-279ENST00000515529 PARP6Q2NL67 630 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 INAVAQ3KP66 663 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 ESRP1Q6NXG1 681 aaKnown RBP25.95■■□□□ 1.74
DDR1-279ENST00000515529 PARGQ86W56 976 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 ATL2Q8NHH9 583 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 SETD7Q8WTS6 366 aaKnown RBP25.95■■□□□ 1.74
DDR1-279ENST00000515529 APOOQ9BUR5 198 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 FICDQ9BVA6 458 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 GPR63Q9BZJ6 419 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 ZFYVE1Q9HBF4 777 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 MAGEE1Q9HCI5 957 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 PKD2L2Q9NZM6 624 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 KNL1Q8NG31 2342 aa25.95■■□□□ 1.74
DDR1-279ENST00000515529 CFAP54Q96N23 3096 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 LRRK1Q38SD2 2015 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 DCDC2BA2VCK2 349 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 CACNB4O00305 520 aaPredicted RBP25.94■■□□□ 1.74
DDR1-279ENST00000515529 FGF1P05230 155 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 ITGAVP06756 1048 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 C1SP09871 688 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 PIRTP0C851 137 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 TSHRP16473 764 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 KCNA4P22459 653 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 RXRGP48443 463 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 SLC1A5Q15758 541 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 SIRPB2Q5JXA9 342 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 RAET1GQ6H3X3 334 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 PNCKQ6P2M8 343 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 KDM7AQ6ZMT4 941 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 LYSMD3Q7Z3D4 306 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 RAVER1Q8IY67 606 aaKnown RBP25.94■■□□□ 1.74
DDR1-279ENST00000515529 NRSN1Q8IZ57 195 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 CBARPQ8N350 705 aaPredicted RBP25.94■■□□□ 1.74
DDR1-279ENST00000515529 PLA2G15Q8NCC3 412 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 OSBPL9Q96SU4 736 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 WDR26Q9H7D7 661 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 GPR27Q9NS67 375 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 SNX12Q9UMY4 172 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 SHOC2Q9UQ13 582 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 ZNF711Q9Y462 761 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 OR1A2Q9Y585 309 aa25.94■■□□□ 1.74
DDR1-279ENST00000515529 H3BM21 787 aa25.93■■□□□ 1.74
DDR1-279ENST00000515529 PGRMC1O00264 195 aaKnown RBP25.93■■□□□ 1.74
DDR1-279ENST00000515529 FLRT2O43155 660 aa25.93■■□□□ 1.74
DDR1-279ENST00000515529 PCDHGA12O60330 932 aa25.93■■□□□ 1.74
DDR1-279ENST00000515529 CD59P13987 128 aa25.93■■□□□ 1.74
DDR1-279ENST00000515529 FZD2Q14332 565 aa25.93■■□□□ 1.74
DDR1-279ENST00000515529 SIX1Q15475 284 aaPredicted RBP25.93■■□□□ 1.74
DDR1-279ENST00000515529 DRICH1Q6PGQ1 229 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms