RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SNTNA6NMZ2 147 aa11.27□□□□□ -0.61
TCOF1-211ENST00000513346 SPTLC1O15269 473 aa11.27□□□□□ -0.61
TCOF1-211ENST00000513346 BCAS2O75934 225 aaPredicted RBP11.27□□□□□ -0.61
TCOF1-211ENST00000513346 KCNH1O95259 989 aa11.27□□□□□ -0.61
TCOF1-211ENST00000513346 PRKG2Q13237 762 aa11.27□□□□□ -0.61
TCOF1-211ENST00000513346 ZC3H3Q8IXZ2 948 aaKnown RBP11.27□□□□□ -0.61
TCOF1-211ENST00000513346 TMEM199Q8N511 208 aa11.27□□□□□ -0.61
TCOF1-211ENST00000513346 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.27□□□□□ -0.61
TCOF1-211ENST00000513346 OR5B17Q8NGF7 314 aa11.27□□□□□ -0.61
TCOF1-211ENST00000513346 NXNL1Q96CM4 212 aa11.27□□□□□ -0.61
TCOF1-211ENST00000513346 H2AFY2Q9P0M6 372 aaPredicted RBP11.27□□□□□ -0.61
TCOF1-211ENST00000513346 CNOT6Q9ULM6 557 aaKnown RBP11.27□□□□□ -0.61
TCOF1-211ENST00000513346 TMCC3Q9ULS5 477 aa11.27□□□□□ -0.61
TCOF1-211ENST00000513346 MAFO75444 373 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 GNRH1P01148 92 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 AMHP03971 560 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 CD97P48960 835 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 CLK2P49760 499 aaKnown RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 APLP1P51693 650 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 KPNA1P52294 538 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 MPP1Q00013 466 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 CCNIQ14094 377 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PTPN20Q4JDL3 420 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 CGB2Q6NT52 195 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 FAM183BPQ6ZVS7 135 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 NECAB2Q7Z6G3 386 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PHTF2Q8N3S3 785 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 TOP1MTQ969P6 601 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ROPN1LQ96C74 230 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SPRTNQ9H040 489 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 MAF1Q9H063 256 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PRDM12Q9H4Q4 367 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ARMC7Q9H6L4 198 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ING3Q9NXR8 418 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ENOPH1Q9UHY7 261 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 TNFSF13BQ9Y275 285 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SPEF1Q9Y4P9 236 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PIPSLA2A3N6 862 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PMM2O15305 246 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 UGT2B4P06133 528 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ENO2P09104 434 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 FLT3LGP49771 235 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 LIMK2P53671 638 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SULT2A1Q06520 285 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SLC35G1Q2M3R5 365 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 TREML2Q5T2D2 321 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PLPPR4Q7Z2D5 763 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PTGR2Q8N8N7 351 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SLC4A11Q8NBS3 891 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SENP8Q96LD8 212 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 LGMNQ99538 433 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 IFT80Q9P2H3 777 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 MYOCOSA0A1B0GUC4 107 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 HTR3EA5X5Y0 456 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 M0QX08 132 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 TMCC2O75069 709 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 TSPAN8P19075 237 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 RHDQ02161 417 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 RELAQ04206 551 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ENPEPQ07075 957 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PFKFB4Q16877 469 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 OGFRL1Q5TC84 451 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ITIH5Q86UX2 942 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 UNC5BQ8IZJ1 945 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SLC7A5P2Q9GIP4 190 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ELOVL4Q9GZR5 314 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ACSS2Q9NR19 701 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SIRPGQ9P1W8 387 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 COL20A1Q9P218 1284 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 COQ4Q9Y3A0 265 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PLIN4Q96Q06 1357 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 MYH6P13533 1939 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 AQP12BA6NM10 295 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 K7EPI3 171 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 CBX4O00257 560 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 BTN3A3O00478 584 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 AZIN1O14977 448 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 LYPLA2O95372 231 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ABCB1P08183 1280 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 CDK4P11802 303 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 DDX5P17844 614 aaKnown RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 HOXD12P35452 270 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 TNFSF9P41273 254 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 IKBKEQ14164 716 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 TTLL9Q3SXZ7 439 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 INTS11Q5TA45 600 aaKnown RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 GLYATQ6IB77 296 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 HIPK1Q86Z02 1210 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 AQP12AQ8IXF9 295 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 DEFB106AQ8N104 65 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SPATA6LQ8N4H0 392 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 SPPL2AQ8TCT8 520 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 POP5Q969H6 163 aaKnown RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 PRR11Q96HE9 360 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 CELF6Q96J87 481 aaKnown RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 ACOX2Q99424 681 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 LHX5Q9H2C1 402 aa11.26□□□□□ -0.61
TCOF1-211ENST00000513346 TRIM45Q9H8W5 580 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-211ENST00000513346 UBA2Q9UBT2 640 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms