RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LAD1O00515 517 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 NEMP1O14524 444 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 CYB561D2O14569 222 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 CLDN3O15551 220 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 KLK10O43240 276 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 HOXC11O43248 304 aaPredicted RBP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 NRP2O60462 931 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 TULP3O75386 442 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 KRT38O76015 456 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 OLFM2O95897 454 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 ELANEP08246 267 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 XBP1P17861 261 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 SLC9A1P19634 815 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 RPA1P27694 616 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 CSNK1EP49674 416 aaKnown RBP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 TPMTP51580 245 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 TSPY1Q01534 308 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 POU5F1Q01860 360 aaKnown RBP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 EIF2B5Q13144 721 aaKnown RBP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 TERF2Q15554 542 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 NPY5RQ15761 445 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 SRSF7Q16629 238 aaKnown RBP eCLIP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 CFAP221Q4G0U5 840 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 C19orf54Q5BKX5 351 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 HES3Q5TGS1 186 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 ANKS6Q68DC2 871 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 ESRP1Q6NXG1 681 aaKnown RBP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 VSTM1Q6UX27 236 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 FRMD7Q6ZUT3 714 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 USP49Q70CQ1 688 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 STRA8Q7Z7C7 330 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 CHPFQ8IZ52 775 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 LNX2Q8N448 690 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 TERB1Q8NA31 727 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 OR10T2Q8NGX3 314 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 ERMNQ8TAM6 284 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 KCNE4Q8WWG9 221 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 FUBP3Q96I24 572 aaKnown RBP eCLIP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 CNDP2Q96KP4 475 aaKnown RBP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 SPATA17Q96L03 361 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 XPO6Q96QU8 1125 aaKnown RBP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 MMS19Q96T76 1030 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 AIFM2Q9BRQ8 373 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 WACQ9BTA9 647 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 GPR174Q9BXC1 333 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 SLC26A6Q9BXS9 759 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 AGXT2Q9BYV1 514 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 CPNE5Q9HCH3 593 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 GALNT9Q9HCQ5 603 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 TRPC7Q9HCX4 862 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 KLHL11Q9NVR0 708 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 WDR35Q9P2L0 1181 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 ORC3Q9UBD5 711 aaPredicted RBP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 TUBGCP4Q9UGJ1 667 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 DMTF1Q9Y222 760 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 DERAQ9Y315 318 aa3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 UTP20O75691 2785 aaKnown RBP3.85□□□□□ -1.79
PDLIM5-218ENST00000513341 TMEM131Q92545 1883 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 CENPEQ02224 2701 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 MYH10P35580 1976 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ARHGEF35A5YM69 484 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 DRGXA6NNA5 263 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 CCDC169A6NNP5 214 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 KPNA7A9QM74 516 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 PYCARD-AS1I3L0S3 204 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 VILLO15195 856 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 PJA2O43164 708 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 MT-CO3P00414 261 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 GSPT1P15170 499 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 CKMT2P17540 419 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ABCB4P21439 1286 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ACP1P24666 158 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 CD27P26842 260 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 PDIA3P30101 505 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 TNFSF9P41273 254 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 MAGEA11P43364 429 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 NPTX2P47972 431 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 RXRGP48443 463 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 TRAPPC10P48553 1259 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ACADVLP49748 655 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 TAF6P49848 677 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ZXDBP98169 803 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 MYL7Q01449 175 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ZBTB16Q05516 673 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 MCL1Q07820 350 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ENPP2Q13822 863 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 STARD3Q14849 445 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 SAFBQ15424 915 aaKnown RBP eCLIP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 CALCRLQ16602 461 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 KRTAP21-3Q3LHN1 58 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ZC2HC1CQ53FD0 456 aaPredicted RBP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 CCDC157Q569K6 752 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 C10orf76Q5T2E6 689 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 C9orf57Q5W0N0 161 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 KIAA0895LQ68EN5 471 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 CPLX2Q6PUV4 134 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ESPNLQ6ZVH7 1005 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 TMEM86AQ8N2M4 240 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 EXD3Q8N9H8 876 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 OR56A1Q8NGH5 318 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms