RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PFKFB2O60825 505 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 VNN2O95498 520 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 F9P00740 461 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TK1P04183 234 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PCCBP05166 539 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCL5P13501 91 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 EZRP15311 586 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC9A1P19634 815 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC5A2P31639 672 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ARHGAP25P42331 645 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TXKP42681 527 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 HSPA13P48723 471 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 MTNR1BP49286 362 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ALDH7A1P49419 539 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 AARSP49588 968 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 IDH3AP50213 366 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 MAP2K6P52564 334 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TSPAN5P62079 268 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 LSM11P83369 360 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ST3GAL1Q11201 340 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SF3A3Q12874 501 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 OVGP1Q12889 678 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 LCP2Q13094 533 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SGCAQ16586 387 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TPD52L1Q16890 204 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 C3orf36Q3SXR2 165 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 VWA5B1Q5TIE3 1220 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 AFMIDQ63HM1 303 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PTRHD1Q6GMV3 140 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PMF1Q6P1K2 205 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 BBS12Q6ZW61 710 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 KDM1BQ8NB78 822 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SETD9Q8NE22 299 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 OR2T34Q8NGX1 318 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 LIPHQ8WWY8 451 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PTERQ96BW5 349 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PERPQ96FX8 193 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 MED30Q96HR3 178 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMX3Q96JJ7 454 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZFRQ96KR1 1074 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SAMD8Q96LT4 415 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 GAL3ST4Q96RP7 486 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 INTS14Q96SY0 518 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 HTATIP2Q9BUP3 242 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 CINPQ9BW66 212 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 SF3B5Q9BWJ5 86 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PARD6BQ9BYG5 372 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 TTYH1Q9H313 450 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PABPC3Q9H361 631 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 LRRC40Q9H9A6 602 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ARHGEF3Q9NR81 526 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 FAM120CQ9NX05 1096 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ABI2Q9NYB9 513 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 KLHL3Q9UH77 587 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 KCNMB2Q9Y691 235 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 ABCB11O95342 1321 aa5.06□□□□□ -1.6
TRAPPC11-208ENST00000511955 PLXNB2O15031 1838 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 MYH6P13533 1939 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 RHBDL1O75783 438 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCNDBP1O95273 360 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 TUBBP07437 444 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 NFICP08651 508 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 HOXD8P13378 290 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 KRT4P19013 534 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 NMT1P30419 496 aaKnown RBP5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 LSP1P33241 339 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 PGM1P36871 562 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 SUMO3P55854 103 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 GSDMDP57764 484 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 TUBB4BP68371 445 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 SP4Q02446 784 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 NOMO1Q15155 1222 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 GKAP1Q5VSY0 366 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 MFSD14CQ5VZR4 134 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 PLA2G4FQ68DD2 849 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 FBXL16Q8N461 479 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 CISD2Q8N5K1 135 aaKnown RBP5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 CEP112Q8N8E3 955 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 GLIS1Q8NBF1 620 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 RCBTB1Q8NDN9 531 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 NSUN7Q8NE18 718 aaKnown RBP5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 MCPH1Q8NEM0 835 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 ADCY4Q8NFM4 1077 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 CMASQ8NFW8 434 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 OR52E1Q8NGJ3 308 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 MAGEC3Q8TD91 643 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 SYTL5Q8TDW5 730 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 SCFD1Q8WVM8 642 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 AZIN2Q96A70 460 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 SHISA4Q96DD7 197 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCDC51Q96ER9 411 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 ALG14Q96F25 216 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 CIB1Q99828 191 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 RNF26Q9BY78 433 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 KLC2Q9H0B6 622 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 HIPK3Q9H422 1215 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 LZTFL1Q9NQ48 299 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 PDGFCQ9NRA1 345 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 KLC4Q9NSK0 619 aa5.05□□□□□ -1.6
TRAPPC11-208ENST00000511955 P4HTMQ9NXG6 502 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms