RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 H3BQ06 376 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 J3KR12 359 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 TIMM23O14925 209 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZIC3O60481 467 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 TSPAN9O75954 239 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 VNN2O95498 520 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 BMP15O95972 392 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 CYC1P08574 325 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 G6PDP11413 515 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 C21orf33P30042 268 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 HOXD3P31249 432 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 HOXD13P35453 343 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 EIF2S3P41091 472 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 CLCN3P51790 818 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 GALCP54803 685 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 CDH8P55286 799 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 SNX16P57768 344 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 NLRP5P59047 1200 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 ADORA2A-AS1P86434 159 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 CREB5Q02930 508 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 CHAF1BQ13112 559 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 CUL4AQ13619 759 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 WTAPQ15007 396 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 TOMM20Q15388 145 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 TWIST1Q15672 202 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 EIF2S3LQ2VIR3 472 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 LEXMQ3ZCV2 418 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZNF549Q6P9A3 640 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 B3GNT6Q6ZMB0 384 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 CHST9Q7L1S5 443 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 TECPR1Q7Z6L1 1165 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 GLCCI1Q86VQ1 547 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 TICAM1Q8IUC6 712 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 WDR63Q8IWG1 891 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 RPAP2Q8IXW5 612 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 TAGAPQ8N103 731 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 SRBD1Q8N5C6 995 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 C1orf131Q8NDD1 294 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 OR14A16Q8NHC5 309 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 OIT3Q8WWZ8 545 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 ARHGEF26Q96DR7 871 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 CALML4Q96GE6 196 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 SLC41A2Q96JW4 573 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 NUDT16L1Q9BRJ7 211 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 PCGF1Q9BSM1 259 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 C1QTNF5Q9BXJ0 243 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 DCLK3Q9C098 648 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 MKKSQ9NPJ1 570 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 HINT3Q9NQE9 182 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 MYO6Q9UM54 1294 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 CDC14AQ9UNH5 594 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 SESN1Q9Y6P5 492 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 STON1Q9Y6Q2 735 aa3.48□□□□□ -1.85
TRAPPC11-207ENST00000511409 hCG_1807616A0A1W2PRN6 198 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 hDV102S1A0JD36 115 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 C1orf226A1L170 272 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 FRMD3A2A2Y4 597 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 CD8B2A6NJW9 211 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 K7ENM7 598 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 VCYO14598 125 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 SERPINI2O75830 405 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 IGKV2-30P06310 120 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 RB1P06400 928 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 TMEM11P17152 192 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 TM4SF1P30408 202 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 GCH1P30793 250 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 PCYT1AP49585 367 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 MXI1P50539 228 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 METAP2P50579 478 aaKnown RBP eCLIP3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 SHBQ15464 509 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 GGNBP1Q5YKI7 109 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 SIGIRRQ6IA17 410 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 GLDNQ6ZMI3 551 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 MTSS1LQ765P7 747 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 FJX1Q86VR8 437 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 ZC3HC1Q86WB0 502 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 SPATA6LQ8N4H0 392 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 AADATQ8N5Z0 425 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 SGCDQ92629 289 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 FAM120BQ96EK7 910 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 RRNAD1Q96FB5 475 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 LRFN5Q96NI6 719 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 KXD1Q9BQD3 176 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 CCDC68Q9H2F9 335 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 PPP1R3EQ9H7J1 279 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 NSMCE4AQ9NXX6 385 aa3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 TTC7AQ9ULT0 858 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC11-207ENST00000511409 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 HSPA12AO43301 675 aa3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 HS6ST1O60243 411 aa3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 CH25HO95992 272 aa3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 TOMM40O96008 361 aa3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 PRSS2P07478 247 aa3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 HOXA11P31270 313 aaPredicted RBP3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 HNRNPH1P31943 449 aaKnown RBP3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 STX2P32856 288 aa3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 ACTN2P35609 894 aa3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 GARSP41250 739 aaKnown RBP3.46□□□□□ -1.86
TRAPPC11-207ENST00000511409 AMTP48728 403 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms