RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SOD1P00441 154 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 FUCA1P04066 466 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 FTH1P19P0C7X4 201 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 RABIFP47224 123 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 NR2C2P49116 596 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 POLR2LP62875 67 aaKnown RBP13.58□□□□□ -0.24
SNF8-206ENST00000509989 CCDC157Q569K6 752 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 RALGPS1Q5JS13 557 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 TECPR1Q7Z6L1 1165 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 SFTPA2Q8IWL1 248 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 SCAMP4Q969E2 229 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 SKA1Q96BD8 255 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 WDR24Q96S15 920 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 CLPBQ9H078 707 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 AMACRQ9UHK6 382 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNF8-206ENST00000509989 SPO11Q9Y5K1 396 aa13.58□□□□□ -0.24
SNF8-206ENST00000509989 CEP295Q9C0D2 2601 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 LY6G6EA0A0G2JKS1 128 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 GOLGA6L3A6NEY3 463 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 GOLGA6L6A8MZA4 724 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 H7C0C1 242 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 APOC4-APOC2K7ER74 178 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 AURKAO14965 403 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 SIGLEC6O43699 453 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 APOC2P02655 101 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 CSF2P04141 144 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 NME1P15531 152 aaKnown RBP13.57□□□□□ -0.24
SNF8-206ENST00000509989 PTPN7P35236 360 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 GRK6P43250 576 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 CHRNA4P43681 627 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 ATP5OP48047 213 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 ARRB1P49407 418 aaPredicted RBP13.57□□□□□ -0.24
SNF8-206ENST00000509989 COPS2P61201 443 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 ALG11Q2TAA5 492 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 KDELC1Q6UW63 502 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 ZNF548Q8NEK5 533 aaPredicted RBP13.57□□□□□ -0.24
SNF8-206ENST00000509989 HTR3CQ8WXA8 447 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 OR1E3Q8WZA6 343 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 NUS1Q96E22 293 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 DTD2Q96FN9 168 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 PDXPQ96GD0 296 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 SLC25A51Q9H1U9 297 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 ABCG8Q9H221 673 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 FGF22Q9HCT0 170 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 KLK13Q9UKR3 277 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 U3KQA8 63 aa13.57□□□□□ -0.24
SNF8-206ENST00000509989 CFAP69A5D8W1 941 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 CAPN8A6NHC0 703 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 DFNA5O60443 496 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 MAGEC1O60732 1142 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 CYP2A6P11509 494 aaPredicted RBP13.56□□□□□ -0.24
SNF8-206ENST00000509989 JUNDP17535 347 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 POLD2P49005 469 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 STC1P52823 247 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 THOP1P52888 689 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 EPHB1P54762 984 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 EIF3EP60228 445 aaKnown RBP13.56□□□□□ -0.24
SNF8-206ENST00000509989 KLF1Q13351 362 aaPredicted RBP13.56□□□□□ -0.24
SNF8-206ENST00000509989 NFATC4Q14934 902 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 DEFB133Q30KQ1 61 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 PNCKQ6P2M8 343 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 ENPP7Q6UWV6 458 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 LYSMD3Q7Z3D4 306 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 RD3Q7Z3Z2 195 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 GLRX5Q86SX6 157 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 PRUNE1Q86TP1 453 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 TRIM74Q86UV6 250 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 PARGQ86W56 976 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 PHACTR4Q8IZ21 702 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 ATG4AQ8WYN0 398 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 CNDP2Q96KP4 475 aaKnown RBP13.56□□□□□ -0.24
SNF8-206ENST00000509989 MRGPRX2Q96LB1 330 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 MLPHQ9BV36 600 aaPredicted RBP13.56□□□□□ -0.24
SNF8-206ENST00000509989 LRRC61Q9BV99 259 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 USP29Q9HBJ7 922 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 SHOC2Q9UQ13 582 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 PPP2R2CQ9Y2T4 447 aa13.56□□□□□ -0.24
SNF8-206ENST00000509989 PCYT1BQ9Y5K3 369 aaPredicted RBP13.56□□□□□ -0.24
SNF8-206ENST00000509989 ANKRD66B4E2M5 251 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 DKK1O94907 266 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 LDOC1O95751 146 aaPredicted RBP13.55□□□□□ -0.24
SNF8-206ENST00000509989 RBP3P10745 1247 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 CES1P23141 567 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 TRIM23P36406 574 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 GDF10P55107 478 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 YPEL5P62699 121 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 MTM1Q13496 603 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 SUZ12Q15022 739 aaKnown RBP13.55□□□□□ -0.24
SNF8-206ENST00000509989 PROX2Q3B8N5 592 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 MEI1Q5TIA1 1274 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 CCDC181Q5TID7 509 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 ESRP1Q6NXG1 681 aaKnown RBP13.55□□□□□ -0.24
SNF8-206ENST00000509989 MACC1Q6ZN28 852 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 USP45Q70EL2 814 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 PID1Q7Z2X4 250 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 ZSCAN30Q86W11 494 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 HID1Q8IV36 788 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 OXR1Q8N573 874 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 TAB3Q8N5C8 712 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms