RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 ZIK1Q3SY52 487 aaPredicted RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 RNF180Q86T96 592 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 CLYBLQ8N0X4 340 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 METTL6Q8TCB7 284 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 RAET1EQ8TD07 263 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 DLG3Q92796 817 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 VPS33AQ96AX1 596 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 RMND5BQ96G75 393 aaPredicted RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 KCTD14Q9BQ13 255 aaPredicted RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 ABCG8Q9H221 673 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 COQ10BQ9H8M1 238 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 TTC3P53804 2025 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 CHRNA1P02708 482 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 ZNF865P0CJ78 1059 aaPredicted RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 PRSS56P0CW18 603 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 LBPP18428 481 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 RPL17P18621 184 aaKnown RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 KCNA5P22460 613 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 ADGRE1Q14246 886 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 TSNQ15631 228 aaKnown RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 ANGPTL8Q6UXH0 198 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 TWIST2Q8WVJ9 160 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 SNRNP27Q8WVK2 155 aaKnown RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 CCDC28BQ9BUN5 200 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 OSBPL2Q9H1P3 480 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 MARCH4Q9P2E8 410 aaPredicted RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 CCDC162PA2VCL2 907 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 NPEPPSL1A6NEC2 478 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 FFAR3O14843 346 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 GPR42O15529 346 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 MAP3K13O43283 966 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 HSPA13P48723 471 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 MLLT6P55198 1093 aaPredicted RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 MFN1Q8IWA4 741 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 TTC9BQ8N6N2 239 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 FAM47BQ8NA70 645 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 MAGEE2Q8TD90 523 aaPredicted RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 GPR21Q99679 349 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 C11orf84Q9BUA3 381 aaPredicted RBP12.89□□□□□ -0.35
SMG7-214ENST00000508461 ACTL7AQ9Y615 435 aa12.89□□□□□ -0.35
SMG7-214ENST00000508461 RBM47A0AV96 593 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 PRRG1O14668 218 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 GRID2O43424 1007 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 NCK1P16333 377 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 FASP25445 335 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 RPL5P46777 297 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 ITGA7Q13683 1181 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 ATP6AP1LQ52LC2 224 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 SIRPB2Q5JXA9 342 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 LPCAT2Q7L5N7 544 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 SLC45A3Q96JT2 553 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 HAPLN3Q96S86 360 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 TBCDQ9BTW9 1192 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 BAG5Q9UL15 447 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 CCDC189A1A4V9 331 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 SDHDO14521 159 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 GJB3O75712 270 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 PRDX6P30041 224 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 ATN1P54259 1190 aaPredicted RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 RHOAP61586 193 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 RPS24P62847 133 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 CDH18Q13634 790 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 LAMB3Q13751 1172 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 TRIM25Q14258 630 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 IL27RAQ6UWB1 636 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 STAG3L4Q8TBR4 150 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 CCSER2Q9H7U1 834 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 CCDC154A6NI56 674 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 PDLIM1O00151 329 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 KPNA6O60684 536 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 KCNQ1P51787 676 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 SULT2A1Q06520 285 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 SCAPQ12770 1279 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 MILR1Q7Z6M3 343 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 DEFB128Q7Z7B8 93 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 CLVS1Q8IUQ0 354 aaPredicted RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 PHC3Q8NDX5 983 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 TSPAN14Q8NG11 270 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 ANKRD49Q8WVL7 239 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 MTFMTQ96DP5 389 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 NSUN5Q96P11 429 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 WWOXQ9NZC7 414 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 MTF2Q9Y483 593 aaPredicted RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 A0A0U1RQS6 177 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 PARNO95453 639 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 RHOQP17081 205 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 UGT1A6P19224 532 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 PGFP49763 221 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 SEMG2Q02383 582 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 TRIM32Q13049 653 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 NEDD8Q15843 81 aa12.88□□□□□ -0.35
SMG7-214ENST00000508461 CWF19L1Q69YN2 538 aaKnown RBP12.88□□□□□ -0.35
SMG7-214ENST00000508461 THAP11Q96EK4 314 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms