RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ILF2Q12905 390 aaKnown RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 SLC12A1Q13621 1099 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 NFYCQ13952 458 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 FRG1Q14331 258 aaKnown RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 SMU1Q2TAY7 513 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 PYCR3Q53H96 274 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 ANKRD34AQ69YU3 496 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 GTF2IRD2BQ6EKJ0 949 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 GTF2IRD2Q86UP8 949 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 HS3ST5Q8IZT8 346 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 MINDY2Q8NBR6 621 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 CLEC4CQ8WTT0 213 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 FAM149B1Q96BN6 582 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 MYRFLQ96LU7 910 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 PDCD2LQ9BRP1 358 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 IRF2BPLQ9H1B7 796 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 PRDM12Q9H4Q4 367 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 CMTM6Q9NX76 183 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 PDE10AQ9Y233 779 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 TMX2Q9Y320 296 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 PCDHGA11Q9Y5H2 935 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 MRPL42Q9Y6G3 142 aaKnown RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 H3BMM5 538 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 GNGT2O14610 69 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 FYNP06241 537 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 CXCL8P10145 99 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 ITGB6P18564 788 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 MAP2K4P45985 399 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 GOLGA7BQ2TAP0 167 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 BNIPLQ7Z465 357 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 PNPT1Q8TCS8 783 aaKnown RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 SLC22A17Q8WUG5 538 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 ITCHQ96J02 903 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 HPS4Q9NQG7 708 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 CAB39Q9Y376 341 aaPredicted RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 AQP12BA6NM10 295 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 HOXC11O43248 304 aaPredicted RBP13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 SLC35E2BP0CK96 405 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 MLNP12872 115 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 ATICP31939 592 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 IFNA8P32881 189 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 NCBP2-AS2Q69YL0 99 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 SLC16A12Q6ZSM3 486 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 AQP12AQ8IXF9 295 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 CENPLQ8N0S6 344 aaPredicted RBP13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 RDH11Q8TC12 318 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 STYXQ8WUJ0 223 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 SLC38A10Q9HBR0 1119 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 ENPP5Q9UJA9 477 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 DYRK3O43781 588 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 TBC1D4O60343 1298 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 ICMTO60725 284 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 ASNSP08243 561 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 THRBP10828 461 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 LCP1P13796 627 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 KCNA5P22460 613 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 CRHBPP24387 322 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 ADPRMQ3LIE5 342 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 NEK5Q6P3R8 708 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 CYS1Q717R9 158 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 CEP97Q8IW35 865 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 COLGALT2Q8IYK4 626 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 RPL3LQ92901 407 aaKnown RBP13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 FTHL17Q9BXU8 183 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 MOV10Q9HCE1 1003 aaKnown RBP13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 JPH1Q9HDC5 661 aaPredicted RBP13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 IL37Q9NZH6 218 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 TOMM70O94826 608 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 CASP3P42574 277 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 ALDH7A1P49419 539 aaKnown RBP13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 LAPTM5Q13571 262 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 PMF1Q6P1K2 205 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 SPRED1Q7Z699 444 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 GALNT13Q8IUC8 556 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 MFSD4AQ8N468 514 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 CELF2-AS1Q8N7Q2 184 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 FAM83FQ8NEG4 500 aaPredicted RBP13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 RORBQ92753 470 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 NODALQ96S42 347 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 SLC30A3Q99726 388 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 EMILIN2Q9BXX0 1053 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 XYLT2Q9H1B5 865 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 TOR3AQ9H497 397 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 NDUFAF1Q9Y375 327 aa13.08□□□□□ -0.32
GAPVD1-220ENST00000497580 UNCXA6NJT0 531 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 PDZK1P1A8MUH7 402 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 VWA5AO00534 786 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 LRIG2O94898 1065 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 KCNK2O95069 426 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 CRYZL1O95825 349 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 FCGR1AP12314 374 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 STMN1P16949 149 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 CAPN3P20807 821 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 FMO4P31512 558 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 NDST1P52848 882 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 TUBA3CQ13748 450 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 PRR23CQ6ZRP0 262 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 TMEM192Q8IY95 271 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 PELI3Q8N2H9 469 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms