RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 BBS12Q6ZW61 710 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 TADA2BQ86TJ2 420 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 CD101Q93033 1021 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 C3orf30Q96M34 536 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 NODALQ96S42 347 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 SIN3AQ96ST3 1273 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 MXRA8Q9BRK3 442 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 EVA1AQ9H8M9 152 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 UBTD1Q9HAC8 227 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 ZNF224Q9NZL3 707 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 SIX4Q9UIU6 781 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.39□□□□□ -1.55
MDM2-220ENST00000496959 KDM5AP29375 1690 aaKnown RBP5.39□□□□□ -1.55
MDM2-220ENST00000496959 DOCK7Q96N67 2140 aa5.39□□□□□ -1.55
MDM2-220ENST00000496959 DHX29Q7Z478 1369 aaKnown RBP5.39□□□□□ -1.55
MDM2-220ENST00000496959 NPHP4O75161 1426 aaPredicted RBP5.39□□□□□ -1.55
MDM2-220ENST00000496959 UMODP07911 640 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 DGKAP23743 735 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 HNRNPH1P31943 449 aaKnown RBP5.38□□□□□ -1.55
MDM2-220ENST00000496959 PGM1P36871 562 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 HALP42357 657 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 CLDN2P57739 230 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 TROAPQ12815 778 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 TAF11Q15544 211 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 OASLQ15646 514 aaKnown RBP5.38□□□□□ -1.55
MDM2-220ENST00000496959 OTUD3Q5T2D3 398 aaPredicted RBP5.38□□□□□ -1.55
MDM2-220ENST00000496959 LDHAL6AQ6ZMR3 332 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 C9orf139Q6ZV77 190 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 GPAT4Q86UL3 456 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 LMNTD1Q8N9Z9 388 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 SCCPDHQ8NBX0 429 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 ZNF570Q96NI8 536 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 CSF3RQ99062 836 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 NUF2Q9BZD4 464 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 RIC8AQ9NPQ8 531 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 SNTG1Q9NSN8 517 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 KIAA1456Q9P272 454 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 VDAC3Q9Y277 283 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 CEP162Q5TB80 1403 aa5.38□□□□□ -1.55
MDM2-220ENST00000496959 PRSS47A8MTI9 375 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 TEX22C9J3V5 150 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 SRCP12931 536 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 ITGAXP20702 1163 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 POU1F1P28069 291 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 NLRP5P59047 1200 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 ZNF155Q12901 538 aaPredicted RBP5.37□□□□□ -1.55
MDM2-220ENST00000496959 ATP13A5Q4VNC0 1218 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 ZNF771Q7L3S4 317 aaPredicted RBP5.37□□□□□ -1.55
MDM2-220ENST00000496959 TMTC1Q8IUR5 882 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 MAB21L3Q8N8X9 362 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 C11orf65Q8NCR3 313 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 TANKQ92844 425 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 FEM1CQ96JP0 617 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 KXD1Q9BQD3 176 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 PHF7Q9BWX1 381 aaPredicted RBP5.37□□□□□ -1.55
MDM2-220ENST00000496959 EBF2Q9HAK2 575 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 NOX4Q9NPH5 578 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 CNOT7Q9UIV1 285 aaKnown RBP5.37□□□□□ -1.55
MDM2-220ENST00000496959 MIA2Q96PC5 1412 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 LRRC9Q6ZRR7 1453 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 MBD5Q9P267 1494 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 MAST1Q9Y2H9 1570 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 UBR1Q8IWV7 1749 aa5.37□□□□□ -1.55
MDM2-220ENST00000496959 KLK8O60259 260 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 LMX1BO60663 402 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 PEX14O75381 377 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 PLGP00747 810 aaPredicted RBP5.36□□□□□ -1.55
MDM2-220ENST00000496959 LINC00271P0C7V0 271 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 HSPA1LP34931 641 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 EFNB1P98172 346 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.36□□□□□ -1.55
MDM2-220ENST00000496959 EFNB3Q15768 340 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 NFIL3Q16649 462 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 KRTAP27-1Q3LI81 207 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 ZNF667Q5HYK9 610 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 LRRC8DQ7L1W4 858 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 SFR1Q86XK3 245 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 ANKRD18AQ8IVF6 992 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 FOXP4Q8IVH2 680 aaPredicted RBP5.36□□□□□ -1.55
MDM2-220ENST00000496959 KCNH5Q8NCM2 988 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 AGBL3Q8NEM8 1001 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 FBXL8Q96CD0 374 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 CTNNAL1Q9UBT7 734 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 ERRFI1Q9UJM3 462 aaPredicted RBP5.36□□□□□ -1.55
MDM2-220ENST00000496959 CAMSAP2Q08AD1 1489 aa5.36□□□□□ -1.55
MDM2-220ENST00000496959 ABCC3O15438 1527 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 SCAF11Q99590 1463 aaKnown RBP5.35□□□□□ -1.55
MDM2-220ENST00000496959 A0A0G2JPF8 293 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 HNRNPCL3B7ZW38 293 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 HNRNPCL1O60812 293 aaKnown RBP5.35□□□□□ -1.55
MDM2-220ENST00000496959 SOCS5O75159 536 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 NDUFS7O75251 213 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 HNRNPCL4P0DMR1 293 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 ETFAP13804 333 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 PSMC2P35998 433 aaKnown RBP5.35□□□□□ -1.55
MDM2-220ENST00000496959 CDH15P55291 814 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 ARL16Q0P5N6 197 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 KRTAP24-1Q3LI83 254 aa5.35□□□□□ -1.55
MDM2-220ENST00000496959 CPLX2Q6PUV4 134 aaKnown RBP5.35□□□□□ -1.55
MDM2-220ENST00000496959 GDPD4Q6W3E5 623 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms